Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase from Pseudomonas putida KT2440

 Score = 74.3 bits (181), Expect = 2e-18
 Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 14/120 (11%)

Query: 72  VSAHCVIRRDGE--VVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFV------ 123
           VS+H +I  DG   V Q V  + RAWHAG S + GR   N  SIGIE+    F       
Sbjct: 63  VSSHYLIG-DGPATVYQLVDENRRAWHAGESQWQGRTWLNSSSIGIEIVNPGFTDTPNGR 121

Query: 124 ---PYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFR-AGL 179
              PY++AQ QAL  L + + V+  +I    I GH  IAPLRK DPG +F W+R   AGL
Sbjct: 122 VWHPYSEAQVQALIALLKDI-VKRNNIEPRHIIGHSDIAPLRKLDPGPLFPWKRLADAGL 180