Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., N-acetylmuramoyl-L-alanine amidase from Magnetospirillum magneticum AMB-1

 Score = 85.5 bits (210), Expect = 6e-22
 Identities = 58/162 (35%), Positives = 79/162 (48%), Gaps = 22/162 (13%)

Query: 15  PSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQHSFFKVIAKMRVSA 74
           PSP+ + R     +  LV+H   +  G+          L  L           A+ +VSA
Sbjct: 7   PSPNFEPRPAGAIVDTLVLHYTGMESGEAA--------LARL---------CDAQAKVSA 49

Query: 75  HCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIEL--EGSDF--VPYTDAQY 130
           H VI  DG V   VP  +RAWHAG SS+ G    N  SIGIEL   G +F    +  AQ 
Sbjct: 50  HYVIEEDGRVFALVPEDMRAWHAGASSWRGEPDVNSRSIGIELVNPGHEFGYRAFPGAQI 109

Query: 131 QALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDW 172
           ++L  L + ++ R+P I    + GH  +AP RK DPG +F W
Sbjct: 110 ESLIRLCRGILERHP-IPARNVVGHSDVAPTRKEDPGELFPW 150