Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 187 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  229 bits (585), Expect = 2e-65
 Identities = 110/177 (62%), Positives = 132/177 (74%), Gaps = 1/177 (0%)

Query: 1   MIDSQGWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQ 60
           M+  +GW   AR+VPSPH D R D E  SLLVVHNISLPPG+FGGP+I+  F G +D + 
Sbjct: 1   MLPDKGWLVEARRVPSPHYDCRPDDEKPSLLVVHNISLPPGEFGGPWIDALFTGTIDPDA 60

Query: 61  HSFFKVIAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS 120
           H FF  IA +RVSAHC+IRRDGE+VQ+VPF  RAWHAGVS++ GR +CND+SIGIELEG+
Sbjct: 61  HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSNYQGRERCNDFSIGIELEGT 120

Query: 121 DFVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFRA 177
           D + YTDAQYQ L  +T+ L+  YP I    +TGH  I P RKTDPG  FDW RFRA
Sbjct: 121 DTLAYTDAQYQQLAAVTRTLIASYPAIA-DNMTGHCNITPDRKTDPGPAFDWPRFRA 176