Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., predicted amidase and lipoprotein (NCBI) from Escherichia coli BW25113

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 48/129 (37%), Positives = 68/129 (52%), Gaps = 17/129 (13%)

Query: 62  SFFKVIAKMRVSAHCVI-----RRDGE--VVQFVPFHLRAWHAGVSSFAGRAKCNDYSIG 114
           S    +   +VS+H ++     R +G+  + Q VP    AWHAG+S++ G  + ND SIG
Sbjct: 58  SSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGISAWRGATRLNDTSIG 117

Query: 115 IELEGSD---------FVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTD 165
           IELE            F P+  AQ QAL  L + ++ RY HI    +  H  IAP RK D
Sbjct: 118 IELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARY-HIKPENVVAHADIAPQRKDD 176

Query: 166 PGLVFDWRR 174
           PG +F W++
Sbjct: 177 PGPLFPWQQ 185