Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) from Escherichia coli BW25113

 Score =  228 bits (580), Expect = 6e-65
 Identities = 111/176 (63%), Positives = 131/176 (74%), Gaps = 1/176 (0%)

Query: 1   MIDSQGWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQ 60
           M+  QGW   AR+VPSPH D R D E  +LLVVHNISLPPG+FGGP+I+  F G +D   
Sbjct: 1   MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60

Query: 61  HSFFKVIAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS 120
           H FF  IA +RVSAHC+IRRDGE+VQ+VPF  RAWHAGVS + GR +CND+SIGIELEG+
Sbjct: 61  HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120

Query: 121 DFVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFR 176
           D + YTDAQYQ L  +T+AL+  YP I    +TGH  IAP RKTDPG  FDW RFR
Sbjct: 121 DTLAYTDAQYQQLAAVTRALIDCYPDIA-KNMTGHCDIAPDRKTDPGPAFDWARFR 175