Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., N-acetylmuramoyl-L-alanine amidase from Enterobacter asburiae PDN3

 Score =  228 bits (581), Expect = 5e-65
 Identities = 112/179 (62%), Positives = 132/179 (73%), Gaps = 1/179 (0%)

Query: 1   MIDSQGWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQ 60
           M+   GW   AR+VPSPH D R + E  +LLVVHNISLPPG+FGGP+I+  F G +D + 
Sbjct: 1   MLLENGWLVDARRVPSPHHDCRPEDEKPTLLVVHNISLPPGEFGGPWIDALFTGTIDPDA 60

Query: 61  HSFFKVIAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS 120
           H FF  IA +RVSAHC+IRRDGEVVQ+VPF  RAWHAGVS + GR +CND+SIGIELEG+
Sbjct: 61  HPFFAEIAHLRVSAHCLIRRDGEVVQYVPFDKRAWHAGVSMYHGRERCNDFSIGIELEGT 120

Query: 121 DFVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFRAGL 179
           D  PYTD+QYQ L  +T+ L+  YP I    ITGH  IAP RKTDPG  FDW RFRA L
Sbjct: 121 DTTPYTDSQYQQLAAVTRTLIGLYPAIA-DNITGHSDIAPERKTDPGPAFDWPRFRAML 178