Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Escherichia fergusonii Becca

 Score =  232 bits (591), Expect = 3e-66
 Identities = 113/177 (63%), Positives = 133/177 (75%), Gaps = 1/177 (0%)

Query: 1   MIDSQGWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQ 60
           M+  QGW   AR+VPSPH D R D E  +LLVVHNISLPPG+FGGP+I+  F G +D   
Sbjct: 1   MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFGGPWIDALFTGTIDPQA 60

Query: 61  HSFFKVIAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGS 120
           H FF  IA +RVSAHC+IRRDGE+VQ+VPF  RAWHAGVS + GR +CND+SIGIELEG+
Sbjct: 61  HPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQYQGRERCNDFSIGIELEGT 120

Query: 121 DFVPYTDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFRA 177
           D + YTDAQYQ L  +T+AL+ RYP I    +TGH  IAP RKTDPG  FDW RFRA
Sbjct: 121 DTLAYTDAQYQQLAAVTRALIDRYPDIA-NNMTGHCDIAPDRKTDPGPAFDWARFRA 176