Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 186 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Dickeya dianthicola ME23

 Score =  212 bits (540), Expect = 3e-60
 Identities = 102/171 (59%), Positives = 126/171 (73%), Gaps = 1/171 (0%)

Query: 6   GWYRLARKVPSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQHSFFK 65
           GW    R+V SPH D R + E  SLLV+HNISLPPG+FGGPYI+Q F G LD  +H +F 
Sbjct: 6   GWLTDVRRVLSPHQDDRPEGELPSLLVIHNISLPPGEFGGPYIDQLFTGTLDGGEHPYFA 65

Query: 66  VIAKMRVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSDFVPY 125
            I ++RVSAHC+IRRDGE+VQ+V F  RAWHAGVS F GR +CND++IGIELEG+D +P+
Sbjct: 66  SICRLRVSAHCLIRRDGEIVQYVAFDQRAWHAGVSQFEGRERCNDFAIGIELEGTDTLPF 125

Query: 126 TDAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRRFR 176
           T  QY  L E+T+ L   Y  IT  +ITGH  IAP RKTDPG +FDW R++
Sbjct: 126 TTEQYARLAEVTRLLSATY-GITPAQITGHSDIAPGRKTDPGPMFDWVRYQ 175