Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., N-acetylmuramoyl-L-alanine amidase from Brevundimonas sp. GW460-12-10-14-LB2

 Score = 76.3 bits (186), Expect = 4e-19
 Identities = 55/164 (33%), Positives = 76/164 (46%), Gaps = 24/164 (14%)

Query: 15  PSPHCDVRHDSEDISLLVVHNISLPPGQFGGPYIEQFFLGELDANQHSFFKVIAKMRVSA 74
           PSP+ D R    D  +LV+H   +  G+     +                    + +VSA
Sbjct: 8   PSPNFDARRAPPD--MLVLHYTGMQTGEAALARLRD-----------------PEAKVSA 48

Query: 75  HCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIEL--EGSDF--VPYTDAQY 130
           H ++  DG V Q VP   RAWHAG   + G   CN  SIGIE+   G +F    + +AQ 
Sbjct: 49  HYLVEEDGRVFQLVPEERRAWHAGRGVWQGEDDCNAASIGIEIVNPGHEFGYRAFPEAQI 108

Query: 131 QALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDWRR 174
            A+  L   +  R+  I   RI  H  +AP RK DPG +F W+R
Sbjct: 109 AAVIALISDIRSRWT-IADNRIIAHSDLAPDRKEDPGELFPWKR 151