Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., N-acetylmuramoyl-L-alanine amidase AmiD precursor from Alteromonas macleodii MIT1002

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 39/144 (27%)

Query: 72  VSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEGSD---------- 121
           VSAH  + R+G++VQ +P +  AWHAG S + GR+  N YSIGIEL+ +           
Sbjct: 68  VSAHFAVGRNGDIVQMLPTNKIAWHAGESYYEGRSGLNQYSIGIELDNAGQLKARGDGTF 127

Query: 122 --------------------------FVPYTDAQYQALTELTQALMVRYPHITLPRITGH 155
                                     +  YTD Q      L +AL     H  +  I GH
Sbjct: 128 ESWFGEIFGESEVLAAQHINQQSMGYWHKYTDIQIVRTLSLCKALC---SHYNISTIVGH 184

Query: 156 QYIAPLRKTDPGLVFDWRRFRAGL 179
           + IAP RK DPG  F  +R +A +
Sbjct: 185 EEIAPSRKVDPGPAFPLQRLKAAV 208