Pairwise Alignments

Query, 181 a.a., 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

 Score = 73.9 bits (180), Expect = 2e-18
 Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 5/106 (4%)

Query: 71  RVSAHCVIRRDGEVVQFVPFHLRAWHAGVSSFAGRAKCNDYSIGIELEG----SDFVPYT 126
           +VS+H  +  DG V+Q VP   RAWHAG SS+AG    N  SIGIE+           + 
Sbjct: 58  QVSSHYFVFEDGRVIQLVPESRRAWHAGKSSWAGDEDINSRSIGIEIANQGHPGGLPEFP 117

Query: 127 DAQYQALTELTQALMVRYPHITLPRITGHQYIAPLRKTDPGLVFDW 172
           +AQ  A+ EL +    R+  I   R+  H  +AP+RK DPG  F W
Sbjct: 118 EAQVAAVIELCRDCGRRW-SIAPERVLAHSDVAPIRKVDPGEKFPW 162