Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., site-specific tyrosine recombinase XerD from Rhodanobacter sp000427505 FW510-R12

 Score =  271 bits (694), Expect = 1e-77
 Identities = 146/294 (49%), Positives = 195/294 (66%), Gaps = 3/294 (1%)

Query: 8   DQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLS 67
           D+  +  F++ +W E GLA+ T+ +YR DL  L  W+A     L     A  ++  ++  
Sbjct: 14  DRRDISTFVERVWSEDGLADRTLEAYRRDLEALALWLAARGRNL---RTARREDISAYHG 70

Query: 68  EQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLS 127
            Q     S AR  SA RR + +L R +    DP+ L+  PKLP  LPK L+E ++E LL+
Sbjct: 71  AQPAAVRSIARRQSAFRRYYAFLARSEPGFADPTLLIERPKLPRSLPKALAEREIEGLLT 130

Query: 128 APDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGE 187
           APD  + L LRD+AMLEL+YA+GLRV+ELV L +  ++ RQGV+RV GKGGK+RLVP+GE
Sbjct: 131 APDTGTTLGLRDRAMLELMYASGLRVSELVELPLAALNPRQGVLRVTGKGGKDRLVPVGE 190

Query: 188 NAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSP 247
            A+  I  +L   R  L   +    +F S RG+ MTRQ FW  +K YA+  GI+ +++SP
Sbjct: 191 EALVRIGAYLTDARPALAKGRQPAALFLSRRGEGMTRQMFWTLVKRYALKVGINPKRISP 250

Query: 248 HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPR 301
           HVLRH+FATHLLN+GADLR +QMLLGHS LSTTQIYT VA E LK+LH +HHPR
Sbjct: 251 HVLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVAKEGLKRLHAQHHPR 304