Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., site-specific tyrosine recombinase XerD from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  206 bits (524), Expect = 5e-58
 Identities = 115/294 (39%), Positives = 184/294 (62%), Gaps = 4/294 (1%)

Query: 12  VEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQN--QYRLDFISFAGLQEYQSWLSEQ 69
           ++QF + +  E+ L+ ++V +Y  D+ KL+++M     Q   + +  A L+++  W++E 
Sbjct: 7   IKQFEEYLKLEKSLSRHSVEAYERDVRKLVDFMDAKGLQVAPEDMKPAILRDFLEWINEL 66

Query: 70  NYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAP 129
              P S+AR LS IR  +++L  E +   DP+  + +PKL  +LP  L+  ++E LLSA 
Sbjct: 67  GMTPHSQARTLSGIRAFYKFLIMEDMMQTDPTDTIEAPKLDRKLPDTLAFHEIEQLLSAI 126

Query: 130 DPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGENA 189
           D  +P   R++AMLE LY++GLRV+EL+ L + N+    G +++ GKG KERLVP+G +A
Sbjct: 127 DLSTPEGTRNRAMLETLYSSGLRVSELLDLRISNLYADAGFLKISGKGEKERLVPIGRDA 186

Query: 190 IEWIETFLQQGR-SLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSPH 248
           ++ I+ +    R  L + +   DI+F + RG +M+R   +  IK     AGI  + +SPH
Sbjct: 187 LKHIQLYRDGIRCHLNIKKGNEDILFLNRRGAKMSRVMVFTIIKDLTAKAGIQ-KTVSPH 245

Query: 249 VLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
             RH+FATHL+  GADLR VQ +LGH  ++TT+IYTH+  + LKQ+  E HPR+
Sbjct: 246 TFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDRDYLKQVIKEFHPRS 299