Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., site-specific tyrosine recombinase XerD from Escherichia coli ECRC101

 Score =  412 bits (1058), Expect = e-120
 Identities = 207/295 (70%), Positives = 236/295 (80%)

Query: 8   DQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLS 67
           D   +EQFLD +W E+ LAENT+ +YR DLS ++EW+      L       LQ   +   
Sbjct: 4   DLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLAERL 63

Query: 68  EQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLS 127
           E  YK TS AR+LSA+RRLFQYL+REK R DDPSA L SPKLP RLPKDLSEAQVE LL 
Sbjct: 64  EGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVERLLQ 123

Query: 128 APDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGE 187
           AP    PLELRDKAMLE+LYATGLRV+ELV LTM ++SLRQGVVRV+GKG KERLVP+GE
Sbjct: 124 APLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVPLGE 183

Query: 188 NAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSP 247
            A+ W+ET+L+ GR  LL   + D++FPS R QQMTRQTFWHRIKHYAV+AGID EKLSP
Sbjct: 184 EAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSP 243

Query: 248 HVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           HVLRHAFATHLLN+GADLRVVQMLLGHSDLSTTQIYTHVATERL+QLH +HHPRA
Sbjct: 244 HVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298