Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., tyrosine recombinase XerC from Dickeya dianthicola ME23

 Score =  167 bits (424), Expect = 2e-46
 Identities = 107/298 (35%), Positives = 163/298 (54%), Gaps = 6/298 (2%)

Query: 6   SPDQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYR-LDFISFAGLQEYQS 64
           SP     E FL  +  ER L+  T +SY + L  +++ ++ +       +  AG++   +
Sbjct: 5   SPLSAPAEAFLRYLRVERQLSPLTQSSYAHQLQVIIDMLSASGIADWQALDAAGVRAVVA 64

Query: 65  WLSEQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEA 124
                     S A+ LSA+R    +L        +P+  + +PK    LPK++   +V  
Sbjct: 65  RSKRAGLNAASLAQRLSALRSFLDWLVGRGELKANPARGVPAPKAGRHLPKNMDVDEVSR 124

Query: 125 LLSAPDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVP 184
           LL   D   PL +RD+AMLE++Y  GLR+ ELV L   ++ L  G V VMGKG KER +P
Sbjct: 125 LLDI-DLSDPLAVRDRAMLEVMYGAGLRLAELVGLDCGHVDLDSGEVWVMGKGSKERKLP 183

Query: 185 MGENAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEK 244
           +G  A+ W+  +L   R +   E   D VF SS G++++ +    R   + V  G++   
Sbjct: 184 IGATAVTWLRHWLAI-RDIYAPE--GDAVFISSLGKRISMRNVQKRFAEWGVKQGVN-SH 239

Query: 245 LSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           ++PH LRH+FATH+L    DLR VQ LLGH++LSTTQIYTH+  + L  +++  HPRA
Sbjct: 240 VNPHKLRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRA 297