Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., tyrosine recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  188 bits (478), Expect = 1e-52
 Identities = 108/293 (36%), Positives = 180/293 (61%), Gaps = 4/293 (1%)

Query: 12  VEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFIS--FAGLQEYQSWLSEQ 69
           ++QF   +  ER L++N++++YR D+ KL  +M      +  ++     L+ + S L+  
Sbjct: 9   IKQFEYYLKIERSLSKNSISAYRRDMEKLSAFMKDAFPGITPLTTQLNHLRAFVSELASL 68

Query: 70  NYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAP 129
                ++AR++S ++  F+++  E    +DP+ LL +PKL  +LP  LS  ++  LL   
Sbjct: 69  GISEYTQARVISGVKAFFKFMVYEDKLEEDPAILLEAPKLGRKLPDTLSYEEIVKLLEGI 128

Query: 130 DPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGENA 189
              +P   R++AMLE+LY++GLRV+ELV L +  +    G +R++GKG KERLVP+G++A
Sbjct: 129 KLGTPEGHRNRAMLEVLYSSGLRVSELVELKLGMVYSDIGFLRILGKGNKERLVPVGKDA 188

Query: 190 IEWIETFLQQGRS-LLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSPH 248
           + +++ +L + R+   +     + VF + RG++MTR   +  IK      GI  +K+SPH
Sbjct: 189 LRYLKLYLDEVRNHQKIAPGHEEYVFLNRRGKKMTRVMVFIFIKKLVEEVGIK-KKVSPH 247

Query: 249 VLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPR 301
             RH+FATHL+  GADLR VQ +LGH  ++TT+IYTH+  E L+Q+  + HPR
Sbjct: 248 TFRHSFATHLIEGGADLRAVQEMLGHESITTTEIYTHLDREYLRQVLTDFHPR 300