Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Site-specific recombinase XerD from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  159 bits (402), Expect = 7e-44
 Identities = 94/292 (32%), Positives = 166/292 (56%), Gaps = 6/292 (2%)

Query: 15  FLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSW---LSEQNY 71
           F++ +  E+  + +TV +Y  DL +  E++ Q+    D ++ AG  E ++W   L EQ  
Sbjct: 5   FINYLEHEKRASAHTVLAYEKDLEQFKEFLEQSFETAD-LTQAGHGEIRAWIVDLVEQGL 63

Query: 72  KPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAPDP 131
             T+  R ++ +R  +++L R      DP+  L + K   +LP+ + E+ ++ LL+  + 
Sbjct: 64  SATTVNRKMATLRSFYKFLLRSGEITKDPTYKLRALKTSKKLPEFVQESTMDQLLNDLEY 123

Query: 132 QSPLE-LRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGENAI 190
           ++  E  RDK ++E LY TG+R++EL+ LT +++ ++   V+V GK  K+R++P+    I
Sbjct: 124 EAGFEGQRDKMVMEFLYLTGVRLSELIGLTWKDIDIQGKTVKVYGKRKKQRIIPLTNTLI 183

Query: 191 EWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSPHVL 250
           E I ++ +  +        SD    +   +Q      +  ++ Y  +      K SPH+L
Sbjct: 184 ENIISYKKDFKETFSNVNESDYFIVTISKKQAYPMIIYRIVRKYLDLFA-QTSKRSPHLL 242

Query: 251 RHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           RH FATHLLN GADL  V+ LLGH++L+ TQ+YTH + E+LK + ++ HP+A
Sbjct: 243 RHTFATHLLNKGADLNAVKDLLGHANLAATQVYTHNSMEKLKAVFDQAHPKA 294