Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Tyrosine recombinase XerC from Acinetobacter radioresistens SK82

 Score =  176 bits (447), Expect = 5e-49
 Identities = 108/299 (36%), Positives = 176/299 (58%), Gaps = 20/299 (6%)

Query: 18  TMWFERGLAEN----TVASYRNDLSKLLEWMAQNQYRLDFISFAGLQEYQSWLSE-QNYK 72
           +MW +    +N    T+++Y  D+   L++ A  +  L+ I  + L+EY +   E +   
Sbjct: 10  SMWLKEREIQNQSAHTLSAYARDVKDFLDFCAVKKLPLNSIEASDLREYLALKVEREQLS 69

Query: 73  PTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEALLSAPDPQ 132
            +S  R LSAIR+  ++  + +    +P+      + P  LP  +    V+ +L  P P+
Sbjct: 70  SSSLQRHLSAIRQFMKWAEQGQYLGFNPADDFQLKRQPRPLPGMIDIETVQQILDQPAPE 129

Query: 133 S----PLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMG-- 186
                 L LRDKAMLELLY++GLR+TEL SL M+++   + ++R+ GKG K R+VP G  
Sbjct: 130 KLQDQHLWLRDKAMLELLYSSGLRLTELQSLCMKDIDFNRRLLRITGKGNKTRIVPFGTQ 189

Query: 187 --ENAIEWIETF-LQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVE 243
             E+ ++W+E + L QG+           VF S +G Q+  +   +R+K  A+ AG++++
Sbjct: 190 AYESLLKWLEVYRLWQGQF-----NADSAVFISQKGGQLGPRQIENRVKLQALRAGVNID 244

Query: 244 KLSPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
            L PH+LRH FA+H+L+   DLR VQ +LGHS+LSTTQIYTH+  + L +++++ HPRA
Sbjct: 245 -LHPHLLRHCFASHMLSNSGDLRAVQEMLGHSNLSTTQIYTHIDFDHLAKIYDQAHPRA 302