Pairwise Alignments

Query, 302 a.a., site-specific tyrosine recombinase XerD from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Tyrosine recombinase XerD from Acinetobacter radioresistens SK82

 Score =  270 bits (691), Expect = 2e-77
 Identities = 140/237 (59%), Positives = 178/237 (75%), Gaps = 2/237 (0%)

Query: 66  LSEQNYKPTSKARMLSAIRRLFQYLHREKVRADDPSALLVSPKLPTRLPKDLSEAQVEAL 125
           L++Q   P S AR LSA+R  F+++  +++R+D+P A   +PKL   LPKDLSE  VE L
Sbjct: 72  LTKQGKSPRSIARTLSALRSFFKFMREQQLRSDNPVATHKTPKLGRALPKDLSELDVEHL 131

Query: 126 LSAPDPQSPLELRDKAMLELLYATGLRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPM 185
           L APD  + L LRD+AMLE+LYA GLRVTEL++L +E ++L+QG +R+ GKG KERLVP+
Sbjct: 132 LHAPDINTALGLRDRAMLEVLYACGLRVTELLNLRLELINLKQGYLRITGKGNKERLVPL 191

Query: 186 GENAIEWIETFLQQGRSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKL 245
           G+ AIEW+E +L + R  L  +  +D +F +  G  M+RQ FW+ IK YA+ AGI  E L
Sbjct: 192 GQVAIEWVEKYLNEARPQLY-KSATDYLFLTQHGGIMSRQNFWYAIKRYALQAGIQAE-L 249

Query: 246 SPHVLRHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHPRA 302
           SPH LRHAFATHLLN+GADLRVVQMLLGHSDLSTTQIYTHVA  R++QLH  HHPRA
Sbjct: 250 SPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQIRMQQLHAAHHPRA 306