Pairwise Alignments

Query, 579 a.a., single-stranded-DNA-specific exonuclease RecJ from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., single-stranded-DNA-specific exonuclease RecJ from Dickeya dianthicola ME23

 Score =  729 bits (1882), Expect = 0.0
 Identities = 364/574 (63%), Positives = 460/574 (80%), Gaps = 6/574 (1%)

Query: 3   EIQRRPEPDLSLLPDHIDPLLRRLYLSRGVSNVAQLEKAAKALHSFKQLHGIDRAVELLF 62
           +++RRP  +  L PD +  LLRRLY  RGV  + +LE++ + L  ++ L GI +AVE+L 
Sbjct: 6   QLRRRPTTETEL-PDSLPALLRRLYAQRGVRQMQELERSLRGLLDYRLLGGITQAVEVLR 64

Query: 63  AAIAEQKRIIVVGDFDADGATSSALSVLALRMLGSRNVDYLVPNRFEDGYGLSPEVVDQA 122
            A+A+ +RI+VVGDFDADGATS+AL+VLALR +G R + YLVPNRFEDGYGLSPEVV QA
Sbjct: 65  QALADNRRIMVVGDFDADGATSTALTVLALRSMGGREIQYLVPNRFEDGYGLSPEVVAQA 124

Query: 123 IERGAEMIMTVDNGVSSLEGVRYAKQKGLQVVVTDHHLPGQELPEVDAMVNPNLQQCAFP 182
             +GAE+I+TVDNG+SS  GV  A ++G+ VVVTDHHLPG+ LP  +AM+NPNL  CAFP
Sbjct: 125 AAKGAELIVTVDNGISSHAGVDDAHRRGIAVVVTDHHLPGETLPAAEAMINPNLSDCAFP 184

Query: 183 SKALAGVGVAFYLMMALCVHMRQQGWFAAQGMVEPKLMELIDLVALGTVADVVPLDDNNR 242
           SKALAGVGVAFYLMMAL  ++R+ GWFA +G+ EP L EL+DLVALGTVADVVPLD NNR
Sbjct: 185 SKALAGVGVAFYLMMALRANLRESGWFAERGLAEPNLAELLDLVALGTVADVVPLDANNR 244

Query: 243 ILVHQGLQRIRAGLARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLDDMSFGVE 302
           IL+ QGL RIRAG  RPGI+AL+EV+ RDA +LVA+D GFALGPR+NAAGRLDDMS GVE
Sbjct: 245 ILISQGLSRIRAGKCRPGIRALLEVSNRDAVQLVASDLGFALGPRLNAAGRLDDMSVGVE 304

Query: 303 LLLCNNIHAARRMASELDGLNQTRKEIEEGMKQEAVAFCERLQLSDDRELPYGLVLFQRD 362
           LLLC++I  AR +AS+LD LNQ+R+EIE GM+ EA+  CE+L+ S D  LP GL ++  +
Sbjct: 305 LLLCDDIVQARMLASDLDALNQSRREIEAGMQVEALHLCEQLERSRD-TLPLGLAMYHPE 363

Query: 363 WHQGVIGILASRIKEKYHRPVIAFAEGGDGKLKGSCRSVPGLHMRDALDKIDTQNPGIIL 422
           WHQGV+GILASRIKE++HRPVIAFA  GDG LKGS RS+ GLH+RDAL+++DT +PG++L
Sbjct: 364 WHQGVVGILASRIKERFHRPVIAFAPAGDGILKGSGRSIAGLHLRDALERLDTCHPGLML 423

Query: 423 KFGGHAMAAGLTIEEQNFERFCRLFDQLVREELDEAALKGIILSDGELKPEEFSLHTAEL 482
           KFGGHAMAAGL++ E  F+ F + F +LV E LD + L+G++ SDGEL   E +L TAE+
Sbjct: 424 KFGGHAMAAGLSLVEDRFDEFRQRFAELVGEWLDASQLEGVVWSDGELAIPELTLGTAEM 483

Query: 483 LRAGGPWGQAFPEPLFDGEFKVLHQKLVGEKHLKLMLEPLYKGFPTNVMIDGIAFNVDLR 542
           LR  GPWGQAFPEP FDG F++L Q+LVGE+HLK+M+EPL  G     ++DGIAFN+D  
Sbjct: 484 LREAGPWGQAFPEPTFDGRFRLLQQRLVGERHLKVMVEPLGGG----PLLDGIAFNIDTL 539

Query: 543 RWPDASVKTVRLAYKLDINEFRGNQSLQLMIDHL 576
            WPD+SV+ V LAYKLD+NEFRG +S+QL+I+HL
Sbjct: 540 LWPDSSVREVELAYKLDVNEFRGKRSVQLLIEHL 573