Pairwise Alignments

Query, 256 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., DNA-binding transcriptional repressor (NCBI) from Escherichia coli BW25113

 Score =  140 bits (354), Expect = 2e-38
 Identities = 83/249 (33%), Positives = 139/249 (55%), Gaps = 8/249 (3%)

Query: 10  KLSDVIEQELERLIVEGTLSPGQQLPPERELAKQFEVSRPSIREAIQRLEAKRLLTRRQG 69
           +LSD +   +  LI E  L  G +LP ER+LA Q  VSR S+REA+ +L ++ +L  R+G
Sbjct: 7   RLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVSRNSLREALAKLVSEGVLLSRRG 66

Query: 70  GGTFVSDR--IW--QSFSDPLLNLLSSHSETQLDLLEARHALEGICAYFAALRGTEEDFA 125
           GGTF+  R   W  Q+   PL  L++   +   D+LEAR+A+E   A+ AA+R T  D  
Sbjct: 67  GGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDILEARYAIEASTAWHAAMRATPGDKE 126

Query: 126 RIQHCVTRIAEAQALNNVDEEAERVMAFLIAITEAAHNVVLLHIVRSLSPLLEQNIRQNF 185
           +IQ C     EA    + D  ++  + F +AI EA+HN+VLL  +R    +L+ +++ + 
Sbjct: 127 KIQLCF----EATLSEDPDIASQADVRFHLAIAEASHNIVLLQTMRGFFDVLQSSVKHSR 182

Query: 186 KLLHRRPEAVEKVSKHRANIVDAIVSGQPEKAREMSHSHLAYIEETLLDLTREQTRRERS 245
           + ++  P    ++++    ++DAI +G  + AR+   +HL+++  T+     +Q R  R 
Sbjct: 183 QRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAMMAHLSFVHTTMKRFDEDQARHARI 242

Query: 246 LRRIQQGNE 254
            R   + NE
Sbjct: 243 TRLPGEHNE 251