Pairwise Alignments

Query, 256 a.a., pyruvate dehydrogenase complex transcriptional repressor PdhR from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., GntR family transcriptional regulator from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 5/220 (2%)

Query: 6   IRQPKLSDVIEQELERLIVEGTLSPGQQLPPERELAKQFEVSRPSIREAIQRLEAKRLLT 65
           I +  L+D++ + + R I  G  +P ++LP E ELA +FEVSRP IREA++RL  + L+ 
Sbjct: 7   IARKGLADIVFERMLRAIKSGAYNPDERLPTEHELAAEFEVSRPVIREALKRLRDQGLIY 66

Query: 66  RRQGGGTFVSDRIWQSFSDPLLNLLSSHSETQLDLLEARHALEGICAYFAALRGTEEDFA 125
            R+G G+FV          PL      +    L+  E R  LE   A  AA R   +   
Sbjct: 67  SRRGAGSFVRS---VGLRQPLGFGQLENVADLLNCYEFRLTLEPAAAAAAATRHDADSLK 123

Query: 126 RIQHCVTRIAEAQALNNVDEEAERVMAFLIAITEAAHNVVLLHIVRSLSPLLEQNIRQNF 185
            I+  +  + +A    +  E+A+    F +AI  AA N      + +L   +   ++ + 
Sbjct: 124 AIRQALELLRDATNRQSHREDAD--FQFHLAIARAAQNTYFSTAMEALKDHIAVGMKFHG 181

Query: 186 KLLHRRPEAVEKVSKHRANIVDAIVSGQPEKAREMSHSHL 225
             + R    + +V      I  AI  GQ + AR +   HL
Sbjct: 182 ASIRREATGLTRVFAEHEAIAKAIADGQEDDARRLMFEHL 221