Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., S-adenosyl-methyltransferase (NCBI) from Escherichia coli BW25113

 Score =  402 bits (1032), Expect = e-117
 Identities = 197/316 (62%), Positives = 258/316 (81%), Gaps = 7/316 (2%)

Query: 1   MTASFQHISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQA 60
           M  +++H +VLL+E++ GL I+PDGIYIDGTFGRGGHSR IL+QLG EGRL +IDRDPQA
Sbjct: 1   MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQA 60

Query: 61  IAEAQKIDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMK 120
           IA A+ IDDPRF+I+HGPFS + EY    DL+GK+DG+L DLGVSSPQLDDAERGFSFM+
Sbjct: 61  IAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMR 120

Query: 121 DGPLDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPL 180
           DGPLDMRMDPT G   + WL  A+  DI WV++ +GE++ A+RIA+AIVE R  E  +P+
Sbjct: 121 DGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVE-RNRE--QPM 177

Query: 181 TRTSQLAKLISDAAPKSFKEK-KHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGR 239
           TRT +LA++++ A P   K+K KHPATR FQA RI++NSELEEI+ AL+ + ++LAP GR
Sbjct: 178 TRTKELAEVVAAATP--VKDKFKHPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGR 235

Query: 240 LSVISFHSLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQEV 299
           LS+ISFHSLEDR+VKRFMR+ S+GPQVP G+P+T++Q++ LG  +++ +GK L P ++EV
Sbjct: 236 LSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKLGGRQLRALGK-LMPGEEEV 294

Query: 300 ELNPRSRSSVLRVAEK 315
             NPR+RSSVLR+AE+
Sbjct: 295 AENPRARSSVLRIAER 310