Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH from Fusobacterium nucleatum SB010

 Score =  201 bits (511), Expect = 2e-56
 Identities = 127/315 (40%), Positives = 183/315 (58%), Gaps = 16/315 (5%)

Query: 7   HISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
           HI VL  E+++ L I PDG+YID T G G HS  IL +L  +G L SID+D  AI  ++K
Sbjct: 9   HIPVLYYETLDNLVINPDGVYIDCTLGGGSHSEGILERLSDKGLLISIDQDSTAIEYSKK 68

Query: 67  IDDP---RFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGP 123
             +    ++ +  G F  I   A     V KVDG+L D+GVSS QLDD +RGFS+  D  
Sbjct: 69  RLEKFGSKWKVFKGNFENIDTIAYMAG-VDKVDGILMDIGVSSKQLDDPKRGFSYRYDVK 127

Query: 124 LDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRT 183
           LDMRM+    +     +     + ++ +I E+GE++HAR+IAK IVE R++    P+ +T
Sbjct: 128 LDMRMNTDQKISAYDIVNTYTEEQLSKIIFEYGEERHARKIAKLIVEERKSS---PIGKT 184

Query: 184 SQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVI 243
           S L  LI  A P+  +  KHPA + FQA RI +N ELE +  A+  A+++L   GRL++I
Sbjct: 185 SDLITLIKRAYPE--RASKHPAKKTFQAIRIEVNRELEVLGNAISKAAELLKVGGRLAII 242

Query: 244 SFHSLEDRMVKRFMRKESQGPQVPHGIPLTQDQIRALGSAKMKTV--GKALKPSDQEVEL 301
           +FHSLEDR+VK   +  +   + P  IP     I   G  K   +   K + P D E++ 
Sbjct: 243 TFHSLEDRIVKNKFKDLATACKCPKDIP-----ICVCGGVKKFEIITKKPIIPIDDELKN 297

Query: 302 NPRSRSSVLRVAEKL 316
           N R+ SS LR+ E++
Sbjct: 298 NNRAHSSKLRILERI 312