Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., S-adenosyl-methyltransferase MraW from Bacteroides ovatus ATCC 8483

 Score =  197 bits (501), Expect = 3e-55
 Identities = 122/310 (39%), Positives = 177/310 (57%), Gaps = 16/310 (5%)

Query: 7   HISVLLNESIEGLAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQK 66
           H+ VLL ES++G+ I+PDG Y+D TFG  GHSR IL++LG  GRL   D+D  A  E   
Sbjct: 14  HVPVLLKESVDGMNIQPDGTYVDVTFGGAGHSREILSRLGEGGRLLGFDQDEDA--ERNI 71

Query: 67  IDDPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGPLDM 126
           ++D  F  V   F  +  +  RY  + +VD +L DLGVSS   DD+ERGFSF  DG LDM
Sbjct: 72  VNDTHFIFVRSNFRYLHNFL-RYHNIEQVDAILADLGVSSHHFDDSERGFSFRFDGALDM 130

Query: 127 RMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRTSQL 186
           RM+  +GM  +  +   D + +  ++  +GE K++R++A  IV+ R  +    +    ++
Sbjct: 131 RMNKRAGMTAADIVNTYDEERLANILYLYGELKNSRKLASVIVKARSGQNIRTIGEFLEV 190

Query: 187 AKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVISFH 246
            K +        +EKK  A + FQA RI +N E+E +   L  A++ L P GRL VI++H
Sbjct: 191 IKPLFGRE----REKKELA-KVFQALRIEVNQEMEALKEMLLAATEALKPGGRLVVITYH 245

Query: 247 SLEDRMVKRFMRKES-QGPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQEVELNPRS 305
           SLEDRMVK  M+  + +G          Q   R + +       K + P + E+E NPRS
Sbjct: 246 SLEDRMVKNIMKTGNVEGKAETDFFGNLQTPFRLVNN-------KVIVPDEAEIERNPRS 298

Query: 306 RSSVLRVAEK 315
           RS+ LR+AEK
Sbjct: 299 RSAKLRIAEK 308