Pairwise Alignments

Query, 316 a.a., ribosomal RNA small subunit methyltransferase H from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Ribosomal RNA small subunit methyltransferase H from Acinetobacter radioresistens SK82

 Score =  273 bits (699), Expect = 3e-78
 Identities = 152/314 (48%), Positives = 216/314 (68%), Gaps = 18/314 (5%)

Query: 7   HISVLLNESIEG-LAIKPDGIYIDGTFGRGGHSRTILAQLGPEGRLYSIDRDPQAIAEAQ 65
           HISVLL+E++   LA +  GIY+D TFGRGGHSR +LAQL  + ++Y+ D+DPQA+A A 
Sbjct: 3   HISVLLHETVAAVLAERNTGIYVDATFGRGGHSRELLAQLNTDAQVYAFDKDPQALAVAA 62

Query: 66  KID--DPRFTIVHGPFSGIAEYAQRYDLVGKVDGVLFDLGVSSPQLDDAERGFSFMKDGP 123
           +++  D RF I+H  F+ + +  ++  +  +VDG++ DLGVSSPQLD AERGFSFM+DGP
Sbjct: 63  ELEQQDARFKIIHASFADLKQELEKIGIT-EVDGIMADLGVSSPQLDQAERGFSFMQDGP 121

Query: 124 LDMRMDPTSGMPVSAWLAQADLDDITWVIREFGEDKHARRIAKAIVEYRENELNEPLTRT 183
           LDMRMD + G   + WL   + + +  +I ++GE++++RR+A+AI +         +  T
Sbjct: 122 LDMRMDNSQGQTAAEWLVNIEEEALANIIYQYGEERYSRRLARAIKQAGY------IATT 175

Query: 184 SQLAKLISDAAPKSFKEKKHPATRAFQAFRIYINSELEEIDTALRGASDILAPQGRLSVI 243
            QLA+L+  A PK +++ KHPATR FQA RI IN ELE+I+  L  A DIL P GRL+VI
Sbjct: 176 GQLAELVKAAHPK-WEKHKHPATRTFQAIRIAINKELEDIELFLPQAVDILKPHGRLAVI 234

Query: 244 SFHSLEDRMVKRFMRKESQ-GPQVPHGIPLTQDQIRALGSAKMKTVGKALKPSDQEVELN 302
           SFHSLEDR++K+F++KES        G+P  Q   R     ++K + + +K SD EV+ N
Sbjct: 235 SFHSLEDRLIKQFIQKESSLAEDSGWGMPQIQQDTR-----RLKKISR-IKASDAEVKEN 288

Query: 303 PRSRSSVLRVAEKL 316
           PRSRS+ LRVAE+L
Sbjct: 289 PRSRSAWLRVAERL 302