Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., penicillin-binding protein 2 from Rhodanobacter sp000427505 FW510-R12

 Score =  184 bits (468), Expect = 8e-51
 Identities = 167/625 (26%), Positives = 274/625 (43%), Gaps = 92/625 (14%)

Query: 12  VSPRVTTAEPAPIFIRWRFYLLLFFVLTAFCA--LVARVAYIQIIEPDNLIKEGDLRSIR 69
           + PR +  +P    + +R   L  FVL   C   LV R  ++Q++  D  +       ++
Sbjct: 1   MKPRRSIKDPRGESLLFRRRALAGFVLIVLCLCLLVGRFVFLQVMRHDEFVTRSQANRVK 60

Query: 70  AKTLQSARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQE 129
            + +  ARG+I DRNG  LA +VP   +   P  +     L+ +     L +V+ LD  +
Sbjct: 61  PRAIPPARGLIYDRNGVLLADNVPAFRLEVVPEQVKDMPALLAR-----LGEVVPLDPGD 115

Query: 130 M---MKKIEDNRSRRFIYLQRQVSP-AMAKY-IRELKLAGIGLKEESRRYYPAGEVSAHL 184
           +    K+++ +R    + L+  ++   +A++ +   +  G+ +     R YP   + AH+
Sbjct: 116 LDAFRKQLKQSRRFESVPLKLHLTEDEIARFAVNRWRFPGVDVVPYLTRRYPLRGLFAHV 175

Query: 185 VGVTG-IDGHGLE----------------GVERSFDSTLTGESGKSVTRKDKFGRVVENI 227
           VG  G ID   LE                G+ERS+++ L G  G  +   +  GR    +
Sbjct: 176 VGYVGRIDADDLERLDPKRYQGTSHVGRSGIERSYENILHGTPGYELLEVNADGRTQRVL 235

Query: 228 ALEEREEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSY 287
                  G+ + L++D RLQ       K A A +     +AV +D + G VLAMV+ PS+
Sbjct: 236 ETHAPTPGRNLYLSLDVRLQ-------KAAEAAFEGRPGAAVAIDPRNGQVLAMVSVPSF 288

Query: 288 NPN------NRNDWQSFK------MRNRVITDAFEPGSTVKPFVVLAALANGI-ADKNTI 334
           +PN       + D+ +        + NR +   + PGSTVKP + LA L  G+   ++T+
Sbjct: 289 DPNLFVNGIGQADYAALTNDPEKPLYNRALRGVYPPGSTVKPLIGLAGLETGMRTPQDTV 348

Query: 335 IDTGDGTM--QIGGSRVRDTSKVGKADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVG 392
           + TG   +  Q  G R      VG+ DL   +++S N    KLAL+M ++   G     G
Sbjct: 349 VSTGVFYIPGQQRGYRDDQRGGVGRVDLVGAIEQSVNTYFYKLALDMGIDRFSGYMGKFG 408

Query: 393 LGEMSGLDLVGETIGIFPN--------RRRWSQFEIATLSFGYGL-AITPIQLAHAYATL 443
            G  +G+DLVGE+ G+ P+        R+ W   E      G G  A+TP+QL HA AT 
Sbjct: 409 FGRPTGIDLVGESSGVLPSREWKAANFRQPWYPGETVIAGIGQGYWAVTPLQLGHAIATF 468

Query: 444 GNHGKYQPIHIIKGDQHGET----------------RQVVDPKYVNQVLEMLETVTQPGG 487
             HG      +    Q G                  R+  D   VNQ ++ +    +  G
Sbjct: 469 AGHGVPYAPRLAMATQGGVNAAPQPLANPPSGPSVIRKPADWDVVNQGMQQVIYGARGTG 528

Query: 488 TATRAAVPGYRIAAKSGTSRK------AIAGGYSDEYF-----AYTAGVAPVSDPRISLV 536
                  P Y +A KSGT+ +      A     S EY      A+    AP  +P+I++ 
Sbjct: 529 RQLGVGFP-YLMAGKSGTAERFSRRSEAYDTNRSTEYLATRHRAWFVAYAPADNPQIAVA 587

Query: 537 VMVNEPQGDSYYGGAVAGPVFSEIM 561
            ++        +G + AGP+   I+
Sbjct: 588 AILE----SGAWGASAAGPIVRTIL 608