Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., penicillin-binding protein 2 from Rhodanobacter sp000427505 FW510-R12

 Score =  397 bits (1019), Expect = e-115
 Identities = 214/550 (38%), Positives = 324/550 (58%), Gaps = 9/550 (1%)

Query: 27  RWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGE 86
           R R  +++  +      LVAR   +Q++      ++GD R +R   +  +RG I DRNGE
Sbjct: 23  RRRMVVVVGLLSLVSVGLVARAFDLQVVRKQFYQRQGDARFLREMPIPVSRGTIFDRNGE 82

Query: 87  ALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFIYLQ 146
            LAVS P+ ++WA+P  +     L   +R  ALA  LG+D   +  ++     R F+YL+
Sbjct: 83  PLAVSTPMMSIWANPAEV-----LDSDERIPALAQALGVDADSLKAQLAQRSDREFVYLR 137

Query: 147 RQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSFDSTL 206
           RQ++PA A+ + +L + GI  + E +RYYP+GEV+AH++G T ID  G EG+E ++D  L
Sbjct: 138 RQMAPAAAQAVLDLGIPGINGQREFKRYYPSGEVTAHVLGFTNIDDRGQEGLELAYDDWL 197

Query: 207 TGESGKSVTRKDKFGRVVENI-ALEEREEGKPIQLTIDQRLQAIAFRAVKQAMADYRATS 265
            G+ G     +D+ G VVE++  +   + G+ + L+ID+R+Q +A+  +K A+   +A S
Sbjct: 198 AGKPGAKRVIRDRMGHVVEDLEQVRAPKPGQNLTLSIDRRIQFLAYSELKNALEKSQADS 257

Query: 266 ASAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFKMRNRVITDAFEPGSTVKPFVVLAALA 325
            S  +LDVKTG VLAM N P+YNPN     +  + RNR +TD  EPGST+KP ++ AAL+
Sbjct: 258 GSIAVLDVKTGEVLAMANLPTYNPNALGGSRPGQRRNRAMTDVLEPGSTIKPVLMAAALS 317

Query: 326 NG-IADKNTIIDTGDGTMQIGGSRVRDTSKVGKADLTLILKKSSNIGVAKLALEMPLEAL 384
           +G     + IIDT  G     G  + DT   G    T ++ KSSN+G A +A+ +    +
Sbjct: 318 SGKYTPTSPIIDTTGGHWYFQGHDIHDTHNYGLLTPTGVITKSSNVGAAHIAMTLDTALM 377

Query: 385 LGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYGLAITPIQLAHAYATLG 444
              Y + G G  +     GE  G     R W   E A L +GYGL +T +QL +AYAT+ 
Sbjct: 378 YDTYRAFGFGNSTESGFPGEAAGSLRIGRSWRPLEKAILGYGYGLNVTVLQLVNAYATIA 437

Query: 445 NHGKYQPIHIIKGDQHGETRQVVDPKYVNQVLEMLETVTQPGGTATRAAVPGYRIAAKSG 504
           + G       IKG     ++Q++ P+   Q+L M+ETVT PG T T A +  Y +A K+G
Sbjct: 438 DGGVMHSPSFIKGGD-ATSKQIISPEVAGQLLRMMETVTGPGSTGTLARIANYSVAGKTG 496

Query: 505 TSRKAIAGGYS-DEYFAYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAGPVFSEIMKG 563
           T+ KA  GGY+   Y +  AG+ P S+PR++ VV+++ PQ  SYYGG V+GPVFS +M+G
Sbjct: 497 TAHKASIGGYAKSNYTSAFAGIVPASNPRLAAVVVIDNPQKGSYYGGTVSGPVFSRVMEG 556

Query: 564 ALQILNIAPD 573
           AL++L++ PD
Sbjct: 557 ALRLLDVPPD 566