Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., penicillin-binding protein 2 from Pseudomonas simiae WCS417

 Score =  174 bits (442), Expect = 7e-48
 Identities = 177/619 (28%), Positives = 271/619 (43%), Gaps = 95/619 (15%)

Query: 20  EPAPI--------FIRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAK 71
           EP PI         +  R       V+   CALVAR+ ++Q+++ D      +   +   
Sbjct: 3   EPIPIKDHEKENRLVNKRLLACALLVIGITCALVARMYFLQVVQFDYHSTISENNRVHVL 62

Query: 72  TLQSARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGL---DRQ 128
            +   RG+I DRNG  LA + P     +  + I +E     K    A+  +L L   DR 
Sbjct: 63  PITPTRGLIYDRNGVVLADNRP-----SYNLTITRERTTDLKGELDAIVSLLHLPAEDRA 117

Query: 129 EMMKKIEDNRS-----RRFIYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAH 183
              K ++  R        F  L  +    +A  + E +L G+ ++ +  R+YP G   AH
Sbjct: 118 VFDKALKQARHPFVPVTLFYELTEEQIALLA--VNEFRLPGVDVEPQFVRHYPLGAHFAH 175

Query: 184 LVGVT-----------------GIDGHGLEGVERSFDSTLTGESGKSVTRKDKFGRVVEN 226
            +G                   G    G  G+ER ++S L G  G      +  GRV+  
Sbjct: 176 SIGYVGRINEKESKALDSVEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRV 235

Query: 227 IALEEREEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPS 286
           +   +   GK I L++D  LQ     A ++A+ D R    S V LD +TG VLAMV+ PS
Sbjct: 236 LKHTDPIPGKNIVLSLDVHLQ----EAAEEALGDRR---GSVVALDPQTGEVLAMVSKPS 288

Query: 287 YNPNNRNDWQSFK------------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNT- 333
           ++PN      SFK            + NRV+   + PGST+KP V +A L +G+    T 
Sbjct: 289 FDPNLFVTGISFKEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTAQTR 348

Query: 334 IIDTGDGTMQIGGSRVRDTSKVGK--ADLTLILKKSSNIGVAKLALEMPLEALLGMYSSV 391
           + D G   +     + R+ +  G    D+   + +S++     LA ++ ++ L    +  
Sbjct: 349 VFDPGYYQLPDFDHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYLAEF 408

Query: 392 GLGEMSGLDLVGETIGIFPN--------RRRWSQFEIATLSFGYG-LAITPIQLAHAYAT 442
           GLG+   LD+  E+ G+ P+        R+ W   E   L  G G + +TP+QLA A A 
Sbjct: 409 GLGQKVSLDMFEESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATAL 468

Query: 443 LGNHGKYQPIHIIKG-------DQHGETRQVV-DPKYVNQVLEMLETVTQPGGTATRAAV 494
           + N G +   H+ K        D++     V+ DP+   QV   ++ V        RAA 
Sbjct: 469 IANKGVWNRPHLAKTINGVPPVDENPMPNVVLKDPRDWEQVNHGMQLVMHDPRGIARAAA 528

Query: 495 PG--YRIAAKSGTSR-KAIAGG--YSDEYF-------AYTAGVAPVSDPRISLVVMVNEP 542
            G  YRIA KSGT++  AI  G  Y+ E         A   G AP   P+I + VM+   
Sbjct: 529 QGAQYRIAGKSGTAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIVISVMIENG 588

Query: 543 QGDSYYGGAVAGPVFSEIM 561
           +     GG VAGPV  +IM
Sbjct: 589 EA----GGRVAGPVVRQIM 603