Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., penicillin-binding protein 2 from Vibrio cholerae E7946 ATCC 55056

 Score =  149 bits (375), Expect = 4e-40
 Identities = 157/607 (25%), Positives = 258/607 (42%), Gaps = 94/607 (15%)

Query: 37  VLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGEALAVSVPVEA 96
           +L     LV  +  IQI +  +     +   I+   +   RG+I DRNG  LA + PV  
Sbjct: 29  ILICMGLLVTNLYNIQINQYQDYKTRSNDNRIKVVPIAPNRGLIFDRNGVLLAENRPVFN 88

Query: 97  VWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMK-KIEDNRSRRFI---YLQRQVSPA 152
           +   P  +      + +     L  ++ +  +++   + E  ++RRF     L +     
Sbjct: 89  LEVIPEKVPNMEETIAR-----LQQLIEISPEKLAAFEKERKQTRRFNSVPLLTQLTDDE 143

Query: 153 MAKY-IRELKLAGIGLKEESRRYYPAGEVSAHLVG-VTGIDGHGLE-------------- 196
           +AK+ + + K  G+ +    +RYYP GEV  H++G V+ I+   LE              
Sbjct: 144 VAKFSVNQHKFPGVSVTANLKRYYPYGEVLTHVIGYVSRINDKDLERLDKEGKKANYQAT 203

Query: 197 ------GVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIA 250
                 G+ER ++  L G +G      +  GRV+  +       GK I L +D  LQ  A
Sbjct: 204 RDIGKLGIERYYEDLLHGTAGYQEVEVNSRGRVIRTLKYVPPIPGKDIVLNLDIELQLYA 263

Query: 251 FRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNN---------RNDWQSFKMR 301
           ++ ++           S V LD K   VLAM ++PSY+PN           +D  + K R
Sbjct: 264 YKLLE-------GRRGSIVALDPKDNGVLAMASSPSYDPNAFVHGISGKAYSDLLNDKRR 316

Query: 302 ---NRVITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRDTSK---- 354
              NR     + PGSTVKPF+ ++AL +GI   NT      G  +I  +  R        
Sbjct: 317 PLVNRTTLGIYPPGSTVKPFIAVSALQDGIITPNT-TRNDPGYWRIPNTDTRPFRDWLRW 375

Query: 355 -VGKADLTLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRR 413
             G+ D+   L++S +    ++A +M ++ L       G G+++G+D+  E+    P R 
Sbjct: 376 GHGRVDIIKSLEESVDTFFYQIAYDMGIDKLSSWMMRFGFGDLTGIDIYEESKANMPTRE 435

Query: 414 --------RWSQFEIATLSFGYGL-AITPIQLAHAYATLGNHGKYQPIHIIK-----GDQ 459
                    W Q +   +  G G    TP+Q+A A + L NHGK    H+++     G+Q
Sbjct: 436 WKMARHKVPWYQGDTIPVGIGQGYWTATPMQIAKATSVLVNHGKVIAPHLLRATIDNGEQ 495

Query: 460 HGETRQV----------VDPKYVNQVLEMLETVTQPG-GTATRA--AVPGYRIAAKSGTS 506
               ++           V  KY +  +  +  V     GTA RA   +P Y  A KSGT+
Sbjct: 496 FSTQKETEYTTYPPIDGVPKKYWDMAIHGMYLVNHGAKGTARRAFQNMP-YESAGKSGTA 554

Query: 507 --------RKAIAGGYSDEY--FAYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAGPV 556
                   +K  A   ++     A   G APV DP++ +  ++    G S  G  V   +
Sbjct: 555 QVFGLAEGQKYNASELAEHLHDHALFTGFAPVKDPKVIVTFVLENGGGGSSNGAPVVRQI 614

Query: 557 FSEIMKG 563
           F  ++ G
Sbjct: 615 FDHVILG 621