Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 588 a.a., penicillin-binding protein 2 from Magnetospirillum magneticum AMB-1

 Score =  217 bits (553), Expect = 9e-61
 Identities = 158/556 (28%), Positives = 269/556 (48%), Gaps = 43/556 (7%)

Query: 27  RWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGE 86
           R R  +     L AF A+ AR+  + +++  N  K       R+  LQ  RG ISDR G 
Sbjct: 39  RSRLVVTAMVFLLAFAAIGARMVDVAVVDR-NPPKAHAQPQARSDELQMERGDISDRTGV 97

Query: 87  ALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFIYLQ 146
            LA S+P  +++A P  +      VE      +  +  LD +E ++++   R  +F+YL+
Sbjct: 98  LLASSLPTVSLFARPEDLKIAKVDVENAAIRLVTVLPELDLEETIERLSSGR--QFVYLK 155

Query: 147 RQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSFDSTL 206
           R ++P     +  L + G+  ++  RR YP G +++H VGVT +D  G+ G+E+ F++ L
Sbjct: 156 RNLTPRQQYDVNSLGIPGLLFEKGERRIYPHGPLASHAVGVTDVDNKGVAGIEKRFENAL 215

Query: 207 TGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSA 266
                                    +E  +P+ L++D R+Q I    + +++ ++ A   
Sbjct: 216 -------------------------KESREPLALSLDIRVQTIVRNELARSIEEFSAVGG 250

Query: 267 SAVMLDVKTGAVLAMVNAPSYNPNNRNDWQSFKMRNRVITDAFEPGSTVKPFVVLAALAN 326
           + +++DV+TG ++AMV+ P ++PN+        M NR    A+E GST K F     L N
Sbjct: 251 TGMVMDVRTGELIAMVSMPDFDPNDPPAPTDPSMFNRATKGAYEMGSTFKLFNTAMVLDN 310

Query: 327 GIADKNTIIDTGDGTMQIGGSRVRDTSKVGK-ADLTLILKKSSNIGVAKLALEMPLEALL 385
           G A+ N+  D     +   G  + D   + +   +  IL  SSNIG A++AL+   E   
Sbjct: 311 GRANLNSSFDASK-PLVFAGHTIHDDHALNRWLTIPEILIHSSNIGSARMALDAGTEVQR 369

Query: 386 GMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYGLAITPIQLAHAYATLGN 445
              + +G+ +   L+L      + P+   W +    T+SFG+GL++TP+QL    A L N
Sbjct: 370 AFMARIGMLQAPPLELPEVGAPLVPS--PWREINTVTISFGHGLSVTPLQLLAGTAALVN 427

Query: 446 HGKYQPIHII---KGDQHGETRQVVDPKYVNQVLEMLETVTQPGGTATRAAVPGYRIAAK 502
            G+Y    ++    GD     R V+ PK  ++ +  L  +    GT  +A VPGY +  K
Sbjct: 428 GGEYHAPTLLARAPGDAVPAIR-VIKPK-TSEAMRQLMRMVVTDGTGKKADVPGYEVGGK 485

Query: 503 SGTSRKAIAGGYSDE-YFAYTAGVAPVSDPRISLVVMVNEPQGDSY-YG----GAVAGPV 556
           +GT+ K   GGY  +   +      P+  PR ++++M++EPQG    YG    G  A P 
Sbjct: 486 TGTAEKVGNGGYRKKAVLSSFIAAFPMDAPRYAVLMMIDEPQGTKQTYGFITAGWTAAPA 545

Query: 557 FSEIMKGALQILNIAP 572
              ++     +L + P
Sbjct: 546 AGRVIAQIAPLLGLMP 561