Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., penicillin-binding protein 2 from Enterobacter asburiae PDN3

 Score =  151 bits (381), Expect = 9e-41
 Identities = 168/629 (26%), Positives = 270/629 (42%), Gaps = 108/629 (17%)

Query: 18  TAEPAPIFIRWRFYLLLFFVLTAFCALVARVAYIQIIEPDNLIKEGDLRSIRAKTLQSAR 77
           TAE A +F+R R  +    +L     L+A +  +QI+   +     +   I+   +  +R
Sbjct: 11  TAESA-LFVR-RALVAFTGILLLTGVLIANLYNLQIVRFTDYQTRSNENRIKLVPIAPSR 68

Query: 78  GIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMK-KIED 136
           GII DRNG  LA++  +  +   P  +      +E     AL  V+ L+  ++   K E 
Sbjct: 69  GIIYDRNGTPLALNRTIYQIEMMPEKVDNVQDTLE-----ALKSVVDLNDDDIAAFKKER 123

Query: 137 NRSRRFIYLQRQVSPAMAKYIR----ELKLAGIGLKEESRRYYPAGEVSAHLVGVTGI-- 190
            RS RF  +  + +    +  R    + +  G+ +K   RRYYP G    H++G      
Sbjct: 124 ARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKGYKRRYYPYGSALTHVIGYVSKIN 183

Query: 191 ---------DGH----------GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEE 231
                    DG           G  G+ER ++  L G++G      +  GRV+  +    
Sbjct: 184 DKDVDRLDKDGKLANYAATHDIGKLGIERYYEDVLHGQTGYEEVEVNNRGRVIRQLKEVP 243

Query: 232 REEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNN 291
            + G  + LT+D +LQ    + ++  +A  RA   + V+ D +TG +LAMV+ PSY+PN 
Sbjct: 244 PQAGHDVYLTLDLKLQ----QYIETLLAGSRA---AVVVTDPRTGGILAMVSMPSYDPNL 296

Query: 292 RNDWQSFK------------MRNRVITDAFEPGSTVKPFVVLAALANGIADKNT-IIDTG 338
             D  S K            + NR     + P STVKP+V ++AL+ G+ ++NT + D G
Sbjct: 297 FVDGISSKDYSGLLNDPNTPLVNRATQGVYPPASTVKPYVAVSALSAGVINRNTSLFDPG 356

Query: 339 DGTMQIGGSRVRDTSKVGKADL--TLILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEM 396
              +     R RD  K G   L  T  L++S++    ++A +M ++ L    S  G G  
Sbjct: 357 WWQLPGSDKRYRDWKKWGHGHLNVTKSLEESADTFFYQVAYDMGIDRLSEWMSKFGYGHY 416

Query: 397 SGLDLVGETIGIFPNR--------RRWSQFEIATLSFGYGL-AITPIQLAHAYATLGNHG 447
           +G+DL  E  G  P R        + W Q +   +  G G    TPIQ+  A   L N G
Sbjct: 417 TGVDLSEERSGNMPTREWKLKRFKKPWYQGDTIPVGIGQGYWTATPIQMNKAMMILINDG 476

Query: 448 KYQPIHIIKGDQHGETRQVVDPKYV--NQVLE-----------------MLETVTQPGGT 488
             +  H+++         V D K V  NQ  E                 M     +P GT
Sbjct: 477 VVKVPHLLQS-------TVEDGKKVPWNQPHEAPVGDIHSGFWEIAKDGMYGVANRPNGT 529

Query: 489 ATR--AAVPGYRIAAKSGTSRKAIAGGYSDEYF------------AYTAGVAPVSDPRIS 534
           A +  A  P Y++AAKSGT++  + G  ++E +                  AP  +P+++
Sbjct: 530 AHKYFAGTP-YKVAAKSGTAQ--VFGLKANETYNAHRIAERLRDHKLMTAFAPYDNPQVA 586

Query: 535 LVVMVNEPQGDSYYGGAVAGPVFSEIMKG 563
            V M+ E  G     G +   +   IM G
Sbjct: 587 -VAMILENGGAGPAVGTIMRQILDHIMLG 614