Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 580 a.a., penicillin binding protein 2 from Agrobacterium fabrum C58

 Score =  213 bits (542), Expect = 2e-59
 Identities = 164/550 (29%), Positives = 268/550 (48%), Gaps = 39/550 (7%)

Query: 33  LLFFVLTAFCALVA-RVAYIQIIEPDNLIKEGDLRSIRAKTLQSARGIISDRNGEALAVS 91
           LL F   AF A+V  R+    + E + +          A  L ++R  + DRNGE LA  
Sbjct: 47  LLIFGFIAFYAVVGGRLVQYGMAEQETVSSIAP-----ADRLMASRPDLLDRNGEVLATD 101

Query: 92  VPVEAVWADPVAIYKEGGLVEKDRWYALADVLGLDRQEMMKKIEDNRSRRFIYLQRQVSP 151
           +   +++A+P  I      +EK R   L D   LD++   +K+  N   RF +L+RQ++P
Sbjct: 102 IRTVSLFAEPHRIVDIDEAIEKLRT-VLPD---LDQRGTYQKLTSNS--RFQWLRRQLTP 155

Query: 152 AMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGHGLEGVERSFDSTLTGESG 211
                I  L + G+G + E RR+YP G  +AH+VG   ID  G+ G+ER  DS    +  
Sbjct: 156 KQQSQILALGIPGVGFRPEKRRFYPGGPTAAHVVGHVNIDNRGVAGMERYVDSQGLAD-- 213

Query: 212 KSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRAVKQAMADYRATSASAVML 271
                       +  + +   +  +P++L+ID R+Q+I    V  A+A ++A  A AV+L
Sbjct: 214 ------------LTALGMTSDQPLEPVKLSIDLRVQSIVREVVTAAIAKFQAIGAGAVVL 261

Query: 272 DVKTGAVLAMVNAPSYNPNNRNDWQSFKMRNRVITDAFEPGSTVKPFVVLAALANGIADK 331
           DV TG VLAM + P Y+PNN  +       NR+    FE GST K F +   L +G    
Sbjct: 262 DVHTGEVLAMASVPDYDPNNPAEGAKEGWLNRMSNGTFEMGSTFKSFTIAMGLDSGRVRL 321

Query: 332 NTIIDTGDGTMQIGGSRVRDTSKVGK-ADLTLILKKSSNIGVAKLALEMPLEALLGMYSS 390
             + D     ++IGG  ++D    G+   +  I + SSNIG AK+A  +  E      + 
Sbjct: 322 GDMFD-ARYPIRIGGFTIKDFHGKGRMLSVPEIFQFSSNIGTAKIADTVGTEGHKEFLTR 380

Query: 391 VGLGEMSGLDLVGETIGIFPNRRRWSQFEIATLSFGYGLAITPIQLAHAYATLGNHGK-Y 449
           +GL  ++ +      + +    R W +    T+SFG+G++ TP+Q A A A L N GK  
Sbjct: 381 LGL--LTRMQTELPEVALPSQPREWKKINSITISFGHGVSTTPLQTAVAGAALVNGGKLI 438

Query: 450 QPIHIIKGDQHGE--TRQVVDPKYVNQVLEMLETVTQPGGTATRAAVPGYRIAAKSGTSR 507
           +P  + +  +  +   +QV+ P   ++ +  L       G+   A V G+ +  K+GT+ 
Sbjct: 439 EPTFLPRTREQADQVAKQVLKPG-ASKDMRFLFEWNGVNGSGRNARVDGFNVGGKTGTAD 497

Query: 508 KAIAGGY-SDEYFAYTAGVAPVSDPRISLVVMVNEPQGDSYYGGAVAG----PVFSEIMK 562
           K + G Y  D+ F       P+ DP+  ++  ++EP+ D   G A+AG    P+  +I+ 
Sbjct: 498 KVVNGRYVHDKNFNAFLSAFPMDDPQYVVLSFIDEPKTDKGNGAALAGTSAAPMVHDIIT 557

Query: 563 GALQILNIAP 572
               +L + P
Sbjct: 558 RTAAVLGVKP 567