Pairwise Alignments

Query, 580 a.a., penicillin-binding protein 3 from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., penicillin-binding protein from Agrobacterium fabrum C58

 Score =  190 bits (482), Expect = 2e-52
 Identities = 151/518 (29%), Positives = 251/518 (48%), Gaps = 47/518 (9%)

Query: 75  SARGIISDRNGEALAVSVPVEAVWADPVAIYKEGGLVEKDRWYALADVL-GLDRQEMMKK 133
           ++R  I DRNG  LA  + + +++ADP  +     +VEK     LA V+  LD +E  ++
Sbjct: 82  ASRPDIVDRNGMLLATDLNMVSLYADPRRVVDPDEVVEK-----LASVIPNLDWRETHRR 136

Query: 134 IEDNRSRRFIYLQRQVSPAMAKYIRELKLAGIGLKEESRRYYPAGEVSAHLVGVTGIDGH 193
           +  +    F +L+RQ++P     I  L + GIG + E RR+YP G  ++H++G   +D  
Sbjct: 137 LRSDTG--FQWLRRQLTPRQQADILNLGIPGIGFRPEKRRFYPGGPAASHIIGHVNVDNQ 194

Query: 194 GLEGVERSFDSTLTGESGKSVTRKDKFGRVVENIALEEREEGKPIQLTIDQRLQAIAFRA 253
           GL G+ER  D     + G +  R          + L      +P++L+ID R+Q I    
Sbjct: 195 GLAGMERYLD-----QQGLADLRA---------VGLASGAPLEPVKLSIDMRVQNIVREV 240

Query: 254 VKQAMADYRATSASAVMLDVKTGAVLAMVNAPSYNPNNRN----------DWQSFKMRNR 303
           V +A + Y A +A +V+LDV+TG VLAM + P Y+PN  +          D++     NR
Sbjct: 241 VVKAKSAYEAEAAGSVILDVETGEVLAMASVPDYDPNEPSRTLADGSIDRDYEK-GWFNR 299

Query: 304 VITDAFEPGSTVKPFVVLAALANGIADKNTIIDTGDGTMQIGGSRVRD-TSKVGKADLTL 362
           +    FE GST K F +   L  G    N+++D     +++GG  ++D   +     +  
Sbjct: 300 MSNATFEMGSTFKSFTLAMGLDAGAITLNSVVD-ASRPIRMGGFTIKDFKGRNRPLSIPE 358

Query: 363 ILKKSSNIGVAKLALEMPLEALLGMYSSVGLGEMSGLDLVGETIGIFPNRRRWSQFEIAT 422
           + + SSNIG A +A ++ +E      + +GL      ++ G      P  R W +    T
Sbjct: 359 VFQYSSNIGTAAVADKVGVEGHQQFLTKLGLLTKMDTEMPGVATPTQP--RVWKKINSVT 416

Query: 423 LSFGYGLAITPIQLAHAYATLGNHGKYQPIHII---KGDQHGETRQVVDPKYVNQVLEML 479
           +SFG+G+A TP+Q A A A L N G       +   K D    +R V++ K  +  +  L
Sbjct: 417 ISFGHGVATTPLQTAVAAAALINGGNLMSPTFLPRSKEDAASISRSVIEQK-TSADMRYL 475

Query: 480 ETVTQPGGTATRAAVPGYRIAAKSGTSRKAIAGGYSD--EYFAYTAGVAPVSDPRISLVV 537
                  G+   A V G+ +  K+GT+ K I G Y+    + A+ AG  P+  P+  ++ 
Sbjct: 476 FNWNGIKGSGRGAQVEGFHVGGKTGTADKVINGRYAKNINFNAFVAGF-PMHKPKYVVLT 534

Query: 538 MVNEPQGDSYYG---GAVAGPVFSEIMKGALQILNIAP 572
           M++ P+     G    + A P+  EI+     +L + P
Sbjct: 535 MIDAPKTGVNGGRTAASTAAPMTREIIAQTAGLLGVKP 572