Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Rhodanobacter sp000427505 FW510-R12

 Score =  344 bits (882), Expect = 5e-99
 Identities = 202/491 (41%), Positives = 281/491 (57%), Gaps = 18/491 (3%)

Query: 37  PKLAALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEA------- 89
           P +  +V++ L LDSR ++ GD F A++G    G  F   A+ +GA +VLAEA       
Sbjct: 22  PDVGRIVVSGLSLDSRRVQRGDAFFALRGSHAHGITFAAGAVQRGARVVLAEAPAPGEFL 81

Query: 90  ------DAQHLNGWVEYRAG-VPVIYLAELGQHLSELAGRLYG--GHHNQLIGVTGTNGK 140
                 DA+     +    G VPV+++  L   +SE+A R Y       +++GVTGTNGK
Sbjct: 82  PLPAGADAEGGRSRLPQAVGEVPVLWIDGLHGQVSEIAARFYRRPSESMRMVGVTGTNGK 141

Query: 141 TTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYT 200
           T+  QL+AQ L LLGH+AA +GT G G    L     TT +A+ +QA L +  +    + 
Sbjct: 142 TSCVQLLAQALTLLGHRAASIGTLGAGVHGQLHEGERTTPDAVTVQALLAEFRDADVSHV 201

Query: 201 ALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIIN 260
           A+E SSH L QGRV  + +    F+NL+RDHLDYHG+M+AY AAK  LF+    ++A IN
Sbjct: 202 AMEVSSHALEQGRVAAVDYEVAAFTNLTRDHLDYHGSMQAYGAAKARLFAWPGLRSAAIN 261

Query: 261 VDDAVGAQWVKQLPQAIGVSLVTKPNTAQA-IWAREVAYAESGITLNFESSWGEGELHAP 319
           +DDA G +   QLP  +     +     +A + A  +  +  G+     + WG   + + 
Sbjct: 262 IDDAFGRELAGQLPAGVERLRFSMAGDEEAEVAASAIVSSTEGLAFLLRTPWGTRAVRSQ 321

Query: 320 LIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQ-KAKMVVDYAHT 378
           LIG FN  NLL  +A L +LG   + ++    +L+PV GRM      Q +  +VVDYAHT
Sbjct: 322 LIGRFNVANLLAVVACLGALGEPFARIVEVVAQLQPVNGRMSRLGGVQGQPLVVVDYAHT 381

Query: 379 PDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESP 438
           PDALE+AL A+R HC G+L  + GCGG+RD GKRP+M AIA + AD  I+TDDNPR E  
Sbjct: 382 PDALEQALTAVRAHCTGKLICVFGCGGERDAGKRPLMGAIAARLADVAIVTDDNPRGEDG 441

Query: 439 QAIVADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHY 498
            AIVA +VAG+       +E  R  A + ALQ A A D +L+AGKGHE YQ  A     +
Sbjct: 442 DAIVAQIVAGMAAARAMAVERDRAVAIADALQLARAGDAVLIAGKGHETYQEGAAGKRPF 501

Query: 499 SDRETAQQLLE 509
            D   A+ +LE
Sbjct: 502 DDMAAARAVLE 512