Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alani ne ligase (EC 6.3.2.10) from Variovorax sp. SCN45

 Score = 77.4 bits (189), Expect = 1e-18
 Identities = 98/365 (26%), Positives = 148/365 (40%), Gaps = 40/365 (10%)

Query: 40  AALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVE 99
           A+ VI  +  D+R + +GD FVA++G   D  +F+ +A  QGA      A A H      
Sbjct: 27  ASTVIARVHTDTRTLAAGDLFVALKGERFDANEFLAEAKKQGA----VAAIAHH------ 76

Query: 100 YRAGVPVIYLAELGQHLSELA-GRLYGGHHNQ----LIGVTGTNGKTTITQLIAQWLELL 154
              G+    LA L    S LA G L  G   Q    LI VTG+NGKTT+TQ+IA      
Sbjct: 77  ---GLEAAGLAGLEVPDSLLALGALGAGWRAQFTLPLIAVTGSNGKTTVTQMIA------ 127

Query: 155 GHKAAVMGTTGNGFLNALEPAANTTGNALQIQATLRDL-AERGAQYTALETSSHGLVQGR 213
              A +     +   +AL  A N   N + +  TL  L A+       L  +  G +   
Sbjct: 128 ---AVLFAARADRGESALATAGN-FNNEIGVPLTLLRLRAQHQRAVLELGMNHPGEIARL 183

Query: 214 VKKLHFVAGVFSNLSRDHLDYHGTMEAYA---AAKFSLFSEHACQNAIINVDDAVGAQWV 270
                    + +N  R+H ++  T+EA A   AA F++  +     A+    DA  + W 
Sbjct: 184 AAMSRPTIALVNNAQREHQEFMATVEAVAVENAAVFAVLPDDG--TAVFPYGDAFTSLWT 241

Query: 271 KQLPQAIGVSLVTKPNTAQAIWAREVAYAESGI-TLNFESSWGEGELHAPLIGEFNACNL 329
                      +T      A  + + A  + G   +   +  G  +    + G  N  N 
Sbjct: 242 DMAHAGGSRRCMTFGEHQDADISLDGAEWKQGAWAVRIRTPIGSFDARLHIAGRHNVVNA 301

Query: 330 LLALATLLSLGFEKSALLATAPKLRPVLGR---MELFQREQKAKMVVD--YAHTPDALEK 384
           L A A  L+ G     + A      PV GR    E+   + +A  +VD  Y   PD++  
Sbjct: 302 LAATACALAAGVSTDIIAAGLSAFEPVKGRSRASEIVLADGRAVTLVDDSYNANPDSVIA 361

Query: 385 ALRAL 389
           A+  L
Sbjct: 362 AIDVL 366