Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 78.2 bits (191), Expect = 6e-19
 Identities = 89/366 (24%), Positives = 154/366 (42%), Gaps = 36/366 (9%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAG 103
           ++ +  DSR I +   FVA+ G   D   F  +A+  GA  +L E          E  A 
Sbjct: 24  VSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVER---------ELDAE 74

Query: 104 VPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGT 163
              + +A+  Q L +L   ++       + +TG+ GKTT+ +++A    +L  K  V+ T
Sbjct: 75  CSQLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVA---SILSQKGQVLYT 131

Query: 164 TGNGFLNALEPAANTTGNALQ-IQATLRD---LAERGAQYTALETSSHGLVQGRVKKLHF 219
            GN          N  G  L  +++T  D   + E GA +      +  LV+  V     
Sbjct: 132 QGN--------FNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDV----- 178

Query: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSE-HACQNAIINVDDAVGAQWVKQLPQAIG 278
              + +N++  HL+  G+M+    AK  ++    A   AI+N+D   G  W   L     
Sbjct: 179 --ALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTV 236

Query: 279 VSLVTKPNTAQAIWAREVAYAESGI-TLNFESSWGEGELHAPLIGEFNACNLLLALATLL 337
            +     + A   + R+V     GI +    +  GE  +   ++G+ N  N L A A  L
Sbjct: 237 KTFSATDHNAD-FYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSL 295

Query: 338 SLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVD-YAHTPDALEKALRALRVHCAGQ 396
            +G   + +      L  V GR+++ Q      ++ D Y  +  A++ A+  L    A +
Sbjct: 296 EMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVR 355

Query: 397 LWAIVG 402
            W I+G
Sbjct: 356 -WLILG 360