Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., D-alanyl-D-alanine-adding enzyme from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 106/427 (24%), Positives = 167/427 (39%), Gaps = 55/427 (12%)

Query: 45  THLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGV 104
           T + +DSR + +G  FVA+ G   DG  ++    A+GA   L E +   ++        +
Sbjct: 26  TGVSIDSRSVSAGQLFVALAGPRFDGHDYLADVKAKGAVAALVEREVADVD--------L 77

Query: 105 PVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTT 164
           P + +A+    L +L           ++ +TG++GKTT+ +++A    +L  +  V  T 
Sbjct: 78  PQLQVADCRLALGQLGALNRAAFDKPVVAITGSSGKTTVKEMLA---SILRTRGLVHATR 134

Query: 165 GNGFLNALEPAANTTGNALQIQATLRDLA-ERGAQYTALETSSHGLVQGRVKKLHFVAGV 223
           GN              N L    TL ++A E  A    L  S  G ++  V        +
Sbjct: 135 GN------------LNNDLGAPLTLLEIAPEHSAAVIELGASRIGEIRYTVGLTQPQVVI 182

Query: 224 FSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN--AIINVDDAVGAQWVKQLPQAIGVSL 281
            +N    H+   G  +    AK  +  E   Q   AI+N+DD     W K    A  V  
Sbjct: 183 INNAGTAHVGEFGGPDKIVEAKGEIL-EGLGQGGIAILNLDDKAFDIW-KARAGAHKVVS 240

Query: 282 VTKPNTAQAIWAREVAYAESG---ITLNFESSWGEGE---LHAPLIGEFNACNLLLALAT 335
             + N      A ++     G    TL+     G GE   +   ++GE N  N L A A 
Sbjct: 241 FARSNPKADFHASDIGRDARGCPSFTLH-----GAGETVAVQLNVLGEHNVSNALAAAAA 295

Query: 336 LLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVD--YAHTPDALEKALRAL---- 389
             ++G   S + A    ++PV GR  + Q       V+D  Y   P ++  A+  L    
Sbjct: 296 AHAVGLSLSGIAAGLAAVQPVKGR-TVAQIAPNGVRVIDDSYNANPTSMCAAIDILAGFS 354

Query: 390 --RVHCAGQL-----WAIVGCG--GDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQA 440
              V   G +     WA  G    GD  RGK   + A+       V     N R  + QA
Sbjct: 355 GRTVLVLGDIGELGQWAEEGHRQVGDYARGKVDALYAVGSNMTHAVKAFGANGRHFATQA 414

Query: 441 IVADMVA 447
            + D V+
Sbjct: 415 ELIDAVS 421