Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 513 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  300 bits (767), Expect = 1e-85
 Identities = 191/479 (39%), Positives = 260/479 (54%), Gaps = 30/479 (6%)

Query: 47  LELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPV 106
           L  DSR + +GD FVA  G A DGR+F+  A+  GA   L E D     G+ + R    V
Sbjct: 22  LHCDSRRVGAGDAFVAWPGAATDGRRFVAGALQAGAVAALVEQDGAQAYGFDDER----V 77

Query: 107 IYLAELGQHLSELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAVMGTT 164
           + +  L      +AG  +G     L  + +TGTNGKT+     AQ L       AV+GT 
Sbjct: 78  VAVPGLKASAGAIAGAFHGTPSAALDMVAITGTNGKTSTAWWTAQLLSFCAMPCAVVGTL 137

Query: 165 GNGFL-------NALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKL 217
           G G         + L     TT + + +QA LR   + G +  A+E SS G+V+GR+   
Sbjct: 138 GMGRPPRPGQADSPLVATGLTTPDPVMLQAELRRFVDSGLKACAVEASSIGIVEGRLNAT 197

Query: 218 HFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAI 277
                VF+N ++DHLD+HG+MEAY  AK  LF      +A++N+DDA GA     L Q  
Sbjct: 198 QLRVAVFTNFTQDHLDFHGSMEAYWTAKAELFDWPGLASAVVNIDDARGADLAATLAQR- 256

Query: 278 GVSLVTKPNTA-----QAIWAREVAYAESGITLNFESSWGEGE------LHAPLIGEFNA 326
           G+ L T    A       ++A+++++  SG+ L        G       L  PL+G +N 
Sbjct: 257 GLDLWTVAIEAGHHGRARLFAQDLSFTHSGMALQVGERDARGRTLAQHALSLPLVGRYNV 316

Query: 327 CNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQR--EQKAKMVVDYAHTPDALEK 384
            NLL  LA+  +LG   +  +     L PV GRME        +  ++VDYAHTPDALEK
Sbjct: 317 SNLLCVLASARALGVALADAVQACAALTPVPGRMEQAAAGVSDQPLVLVDYAHTPDALEK 376

Query: 385 ALRALRVHC---AGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAI 441
           AL+AL+       G LW +VGCGGDRD GKRP+MAA AE+ A R +LT DNPRSE P AI
Sbjct: 377 ALQALQPLARQRGGALWVVVGCGGDRDAGKRPLMAAAAEREAQRPVLTSDNPRSEDPLAI 436

Query: 442 VADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSD 500
           +  MVAGL  P+ A +E  R QA + A+  A A+D++L+AGKGHEDYQ +      +SD
Sbjct: 437 LRQMVAGLASPDAALVEPDRAQAIALAVARADARDVVLIAGKGHEDYQDVKGVKKPFSD 495