Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Magnetospirillum magneticum AMB-1

 Score =  261 bits (668), Expect = 3e-74
 Identities = 177/476 (37%), Positives = 247/476 (51%), Gaps = 20/476 (4%)

Query: 42  LVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYR 101
           + IT L  DSR ++ G  F A+ G   DGR FI  A+A GA  VLA   ++      +  
Sbjct: 10  VTITGLTADSRAVRPGYLFAALPGTKADGRAFIPAALAAGAVAVLAPEGSRP-----DLP 64

Query: 102 AGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVM 161
             V ++  A   +  + +A   +G     +  VTGTNGKT+  +   Q +  LGH AA +
Sbjct: 65  PEVVLVTDANPRRRFALMASAFHGAQPRVMTAVTGTNGKTSTAEFFRQIMARLGHAAAAI 124

Query: 162 GTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVA 221
           GT G            TT +   + A L  LAE G  +  +E SSHGL Q R+  +  +A
Sbjct: 125 GTLGITAPGWDNQGGLTTPDPAGLHADLARLAEMGVTHACMEASSHGLDQHRLDGVRLMA 184

Query: 222 GVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNA--IINVDDAVGAQWVKQLPQAIGV 279
             F+NL+RDHLDYH  M AYA AK  LF+E   + A  +IN D  +  + V +L    G+
Sbjct: 185 AAFTNLTRDHLDYHADMNAYAEAKLRLFAEVLPEGATAVINADSDLAPRAV-ELCAKRGI 243

Query: 280 SLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSL 339
           +++    TA+ +   E     +G  L+ E       +  PL G F A N L AL   L+ 
Sbjct: 244 TVLGFGRTARDLRLIEARPTAAGQELDLEIMGRAVTIRLPLAGRFQADNALAALGLALAC 303

Query: 340 GFEKSALLATAPKLRPVLGRME-LFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLW 398
           G +  A L     L  V GR++ +  R   A + VDYAHTPDALE  L+ALR H A +L 
Sbjct: 304 GADPVAALEALGHLDGVPGRLQQVASRANGAPIYVDYAHTPDALETVLKALRPHAARRLV 363

Query: 399 AIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADM----VAGLTYPER 454
           A+ GCGGDRD GKRP+M AI  + AD +I+TDDNPRSE P AI A +     AG+   +R
Sbjct: 364 AVFGCGGDRDAGKRPLMGAIGCRLADAMIVTDDNPRSEDPAAIRAAVRGACPAGIEIADR 423

Query: 455 AHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLLEL 510
                   +AA   LQ     D++++AGKGHE  Q++    + + D   A+  + L
Sbjct: 424 ----RGAIRAAVSGLQKG---DVLVIAGKGHEQGQIVGASVLPFDDAAEARDAVRL 472