Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 471 a.a., UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase (EC 6.3.2.13) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  490 bits (1262), Expect = e-143
 Identities = 248/467 (53%), Positives = 325/467 (69%), Gaps = 5/467 (1%)

Query: 47  LELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPV 106
           + LDSR+  +GD FVA+ GH  DGR++I +AIAQG   ++AEA  +  +G +    GVPV
Sbjct: 1   MTLDSRVAAAGDLFVAVVGHQADGRRYIPQAIAQGVAAIIAEAKDEASDGEIREMHGVPV 60

Query: 107 IYLAELGQHLSELAGRLYG--GHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTT 164
           +YL++L + LS LAGR Y     + +L+ VTGTNGKTT TQL+AQW +LLG  +AVMGT 
Sbjct: 61  VYLSQLNERLSALAGRFYHEPSENMRLVAVTGTNGKTTTTQLLAQWSQLLGETSAVMGTV 120

Query: 165 GNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVF 224
           GNG L  + P  NTTG+A+ +Q  L  L  +GA + A+E SSHGLVQ RV  L F A VF
Sbjct: 121 GNGLLGKVIPTENTTGSAVDVQHVLASLVAQGATFGAMEVSSHGLVQHRVAALKFAASVF 180

Query: 225 SNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAIGVSLVTK 284
           +NLSRDHLDYHG M  Y AAK+ L+S H    AI+N DD VG +W+  LP A+ VS+   
Sbjct: 181 TNLSRDHLDYHGDMAHYEAAKWMLYSTHHHGQAIVNADDEVGRRWLASLPDAVAVSMEGH 240

Query: 285 PN-TAQAIW--AREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLSLGF 341
            N      W  A  V Y + G T+ F SSWGEGE+ + L+G FN  NLLLALATLL+LG+
Sbjct: 241 INPNCHGRWLKAEAVEYHDRGATIRFASSWGEGEIESRLMGAFNVSNLLLALATLLALGY 300

Query: 342 EKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAHTPDALEKALRALRVHCAGQLWAIV 401
             + LL TA +L+PV GRME+F    K  +VVDYAHTPDALEKAL+A R+HCAG+LW + 
Sbjct: 301 PLTDLLKTAARLQPVCGRMEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVF 360

Query: 402 GCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSESPQAIVADMVAGLTYPERAHIEHHR 461
           GCGGDRD+GKRP+M AIAE+FAD V++TDDNPR+E P+AI+ D++AG+    +  +   R
Sbjct: 361 GCGGDRDKGKRPLMGAIAEEFADIVVVTDDNPRTEEPRAIINDILAGMLDAGQVRVMEGR 420

Query: 462 FQAASYALQHAGAQDIILLAGKGHEDYQVLANETIHYSDRETAQQLL 508
            +A + A+  A   D++L+AGKGHEDYQ++  + + YSDR TA +LL
Sbjct: 421 AEAVTNAIMQAKDNDVVLIAGKGHEDYQIVGTQRLDYSDRVTAARLL 467