Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanine ligase (EC 6.3.2.10) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 84/346 (24%), Positives = 146/346 (42%), Gaps = 40/346 (11%)

Query: 40  AALVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVE 99
           A L +  +  D+R +  G  FVA++G   D   F DKA A GA  +L             
Sbjct: 20  ADLTLDTVITDTRKVTPGCLFVALKGERFDAHDFADKAKANGAGALLVSRPLD------- 72

Query: 100 YRAGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAA 159
               +P + + +  Q   +LA  +      +++ +TG++GKT++ ++           AA
Sbjct: 73  --IDLPQVIVKDTRQAFGQLAAWVRMQVPARVVALTGSSGKTSVKEM----------TAA 120

Query: 160 VMGTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSH--GLVQGRVKKL 217
           ++   GN         A    N + +  TL  L      Y  +E  ++  G +   V   
Sbjct: 121 ILSQCGNTLY-----TAGNFNNDIGVPITLLRL-NHDYDYAVIELGANHQGEIAWTVSLT 174

Query: 218 HFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFS---EHACQNAIINVDDAVGAQWVKQLP 274
              A + +NL+  HL+  G++   A AK  +++   E+    AI+N D+     W     
Sbjct: 175 RPEAALVNNLAAAHLEGFGSLAGVAKAKGEIYTGLPENGI--AIMNADNNDWLNW----Q 228

Query: 275 QAIGVSLVTK--PNTAQA-IWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLL 331
             IG  LV +  PN A +   A  +     G     ++  G  ++  PL G  N  N L 
Sbjct: 229 SIIGDRLVWRFSPNAANSDFTAANIHVTSHGTEFTLQTPMGSIDVLLPLPGRHNIANALA 288

Query: 332 ALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAH 377
           A A  +++G   +A+ A    L+ V GR+   Q  +  ++V+D A+
Sbjct: 289 AAALSMAVGATLTAIKAGLAALKAVPGRLFPIQLSEN-QLVLDDAY 333