Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase from Erwinia amylovora T8

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 83/322 (25%), Positives = 137/322 (42%), Gaps = 33/322 (10%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAG 103
           I  +  D+R    G  F+A++G   D   F+  AI  G + +L                 
Sbjct: 24  IADVTTDTRKAAEGSLFIALKGERFDAHDFVADAITAGCSALLVSK---------RLPVE 74

Query: 104 VPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGT 163
           +P + +A+    L +LA  +    + +++ +TG++GKT++ ++ A  L   G     + T
Sbjct: 75  LPQVVVADTRIALGQLAAWVRQQSNARIVALTGSSGKTSVKEMTAAILRECGE---TLYT 131

Query: 164 TGNGFLNALEPAANTTGNALQIQATLR-DLAERGAQYTALETSSHGLVQGRVKKLHFVAG 222
           TGN F N +          L+++   R  + E GA +      + GLV+         + 
Sbjct: 132 TGN-FNNDI----GVPLTLLRLKPEHRYAVIELGANHQGEIAYTSGLVRPE-------SA 179

Query: 223 VFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQ-NAIINVDDAVGAQWVKQLPQAIGVSL 281
           + +NL+  HL+  G++   A AK  +FS       AIIN D      W     QA+    
Sbjct: 180 LVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPLNGTAIINSDSNDWPHW----QQALHAKT 235

Query: 282 VTKPNTAQA---IWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLS 338
           V + +  QA    +A  V  +  G      S  G+ ++  PL G  N  N L A A  LS
Sbjct: 236 VWRFSPEQADSDFYAANVTISAQGTHFTLHSPLGDVDVILPLPGRHNIANALAASALALS 295

Query: 339 LGFEKSALLATAPKLRPVLGRM 360
           +G   SA+      L+ V GR+
Sbjct: 296 VGAPLSAVRQGLSTLKAVPGRL 317