Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Dickeya dianthicola ME23

 Score = 82.0 bits (201), Expect = 4e-20
 Identities = 80/322 (24%), Positives = 138/322 (42%), Gaps = 28/322 (8%)

Query: 42  LVITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYR 101
           L I+ +  D+R + +G  FVA++G   D   +   A+  GA  +L    ++HL       
Sbjct: 22  LTISEVSTDTRKLTTGCLFVALRGEKFDAHDYAADAVNHGAAALLV---SKHL------P 72

Query: 102 AGVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVM 161
             VP + + +    L  +AG +      +++ +TG++GKT++ ++ A  L   G+   V+
Sbjct: 73  IEVPQLVVDDTRLALGTMAGWVRQQSRARVVALTGSSGKTSVKEMTAAILRQCGN---VL 129

Query: 162 GTTGNGFLNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSH--GLVQGRVKKLHF 219
            T GN              N + +  TL  LA     Y  +E  ++  G +      +  
Sbjct: 130 YTAGN------------FNNDIGVPLTLFRLAPE-HDYAVIELGANHIGEIAYTTAMVRP 176

Query: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQN-AIINVDDAVGAQWVKQLPQAIG 278
            A + +NL+  HL+  G+++  A AK  +FS    Q  AI+N D    A+W   L     
Sbjct: 177 EAALVNNLAAAHLEGFGSLDGVAQAKGEIFSGLPAQGVAIVNADSHDEARWHDALTGKTR 236

Query: 279 VSLVTKPNTAQAIWAREVAYAESGITLNFESSWGEGELHAPLIGEFNACNLLLALATLLS 338
                +       +A +V  +E G      +  G   +  PL G  N  N L A A  L+
Sbjct: 237 WRFSPQARAGVDFYASDVGISERGTDFVLHTPAGAVAVTLPLPGRHNIANALAAAALSLA 296

Query: 339 LGFEKSALLATAPKLRPVLGRM 360
           +G    A+     +L+ V GR+
Sbjct: 297 VGAPLDAVKTGLAQLQAVPGRL 318