Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Alteromonas macleodii MIT1002

 Score =  341 bits (875), Expect = 3e-98
 Identities = 194/490 (39%), Positives = 280/490 (57%), Gaps = 26/490 (5%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAG 103
           I  L LDSR + +   F+AI+GH  DGR FI +AI+ GA ++LA+ +    +G +E R  
Sbjct: 26  IEGLTLDSREVNTRLAFLAIKGHERDGRDFIPQAISLGARVILAQTEDSSAHGQMEMRDH 85

Query: 104 VPVIYLAELGQHLSELAGRLYGGHHNQL--IGVTGTNGKTTITQLIAQWLELLGHKAAVM 161
             +I L EL Q LS LA   Y     ++  + VTGTNGKT+  QL+ Q  + LG ++A +
Sbjct: 86  SVIISLYELPQMLSALAAAFYDYPAQKMTTVAVTGTNGKTSTVQLLTQLKDALGTRSASI 145

Query: 162 GTTGNGFLNALE------PAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVK 215
           GT G+   +  E      PAANTT +A+++Q  L D  +   ++TA E SSH LVQGR+ 
Sbjct: 146 GTLGSSVFDGDETQWSNTPAANTTPDAIRMQYLLADFVQSEVRHTAFEASSHALVQGRLG 205

Query: 216 KLHFVAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQ 275
            +     VF+NL+RDHLDYHGTME Y  AK  L  +   +  ++N +D    +W     +
Sbjct: 206 TVKTDIAVFTNLTRDHLDYHGTMEEYGKAKRLLLQQPGLKAVVLNANDDESKKWDGAADK 265

Query: 276 AI-----GVSLVTKPNTAQAIWARE-------------VAYAESGITLNFESSWGEGELH 317
           +I     G+       + ++ + RE              +Y   G +    SSWG   + 
Sbjct: 266 SITRIWTGIDESGLDGSGESEYLREHNNPQSRHCFATNASYHAGGCSFELVSSWGSAAIS 325

Query: 318 APLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLGRMELFQREQKAKMVVDYAH 377
            PL G+FN  N+L A+ TLL+ G     ++     + PV GRME+F     A +VVDYAH
Sbjct: 326 LPLFGKFNISNVLSAIGTLLAEGERFDDVVNAVNAITPVPGRMEVFPVTGAANLVVDYAH 385

Query: 378 TPDALEKALRALRVHCAGQLWAIVGCGGDRDRGKRPMMAAIAEQFADRVILTDDNPRSES 437
           TPDALEK L + + H  G++W + GCGGDRD+GKRP+M   AE  AD +++T DN RSE 
Sbjct: 386 TPDALEKVLLSAKFHTTGKVWCVFGCGGDRDKGKRPLMGQAAEVGADAIVITTDNSRSED 445

Query: 438 PQAIVADMVAGLTYPERAHIEHHRFQAASYALQHAGAQDIILLAGKGHEDYQVLANETIH 497
           P++I  D++AGL   E A     R QA  + L+HA   DII++AGKGHEDYQ++ ++  +
Sbjct: 446 PESIAEDIMAGLNNRELAVSIPDREQAIRHCLEHAHESDIIIVAGKGHEDYQIIGDKKTN 505

Query: 498 YSDRETAQQL 507
           Y++R    +L
Sbjct: 506 YNERVVVARL 515