Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 477 a.a., UDP-MurNAc-pentapeptide synthetase from Agrobacterium fabrum C58

 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 40/328 (12%)

Query: 44  ITHLELDSRLIKSGDTFVAIQGHAVDGRQFIDKAIAQGAN-LVLAEADAQHLNGWVEYRA 102
           IT + +DSR +K G+ F AI+G  VDG  +   A+A GA+ LV+AEA    L      R 
Sbjct: 26  ITGISIDSRTVKQGEAFFAIKGDRVDGHDYTSFAVANGASLLVVAEAKLPALG-----RL 80

Query: 103 GVPVIYLAELGQHLSELAGRLYGGHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMG 162
            VP+I + ++   L +LA         ++I VTG+ GKTT  +++ Q L   G   A + 
Sbjct: 81  TVPMIVVEDVLAALGKLALAARERTSARIIAVTGSVGKTTTKEMLRQALAPSGRVHAAVA 140

Query: 163 TTGNGF---LNALEPAANTTGNALQIQATLRDLAERGAQYTALETSSHGLVQGRVKKLHF 219
           +  N +   L      A+T     +I          G  ++       G ++  VK +  
Sbjct: 141 SFNNHWGVPLTLARMPADTEFGVFEI----------GMNHS-------GEIRPLVKMVRP 183

Query: 220 VAGVFSNLSRDHLDYHGTMEAYAAAKFSLFSEHACQNAIINVDDAVGAQWVKQLPQAIGV 279
              + + ++  HL     +E  AAAK  +F       ++I   D    + +++  Q  G+
Sbjct: 184 HVAIITTIAPAHLGNFKNIEEIAAAKAEIFEGVEEGGSVILNRDNAQFEQLEEAAQEAGI 243

Query: 280 S-LVTKPNTAQAIWAREVAYAESGIT-------LNFESSWGEGELHAPLIGEFNACNLLL 331
             ++T    A+A +   +A  ES  T       LN E+S    ELH  + G   A N + 
Sbjct: 244 EHILTFGQHAKADF--RLADFESTTTGSTIWAILNGETS----ELHINIPGRHIADNAMA 297

Query: 332 ALATLLSLGFEKSALLATAPKLRPVLGR 359
            L  +   G      L     L  V GR
Sbjct: 298 VLGAVAVTGANLDRALEALGTLEAVKGR 325