Pairwise Alignments

Query, 512 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Agrobacterium fabrum C58

 Score = 67.8 bits (164), Expect = 8e-16
 Identities = 89/329 (27%), Positives = 127/329 (38%), Gaps = 47/329 (14%)

Query: 66  HAVDGRQFIDKAIAQGANLVLAEADAQHLNGWVEYRAGVPVIYLAELGQHLSELAGRLYG 125
           H +D   F    +A G  L   +    H +  +   AGV VI   EL      +  R   
Sbjct: 59  HTIDWSSFSSFVLAPGVPLTHPKP---HWSVDLAKAAGVEVIGDIELF-----IRERRVH 110

Query: 126 GHHNQLIGVTGTNGKTTITQLIAQWLELLGHKAAVMGTTGNGFLNALEPAANTTGNALQI 185
                 I +TGTNGK+T T LIA  L+  G    + G  G   L+   P A         
Sbjct: 111 APDCPFIAITGTNGKSTTTALIAHILQSSGRDTQLGGNIGTAVLSLDPPKAQ-------- 162

Query: 186 QATLRDLAERGAQYTALETSSHGLVQGRVKKLHFVAGVFSNLSRDHLDYHGTMEAYAAAK 245
                       ++  +E SS+ +       ++  AG+  NL+ DHLD HGTM+ YA  K
Sbjct: 163 ------------RFYVVECSSYQI--DLAPTINPTAGILLNLTPDHLDRHGTMQHYADVK 208

Query: 246 FSLFSEHACQNAIINVDDAVGAQWVKQLPQA-IGVSLVTKPNTAQAIWAREVAYAESGIT 304
             L +      AI+ VDD+       ++ +A + V  ++K N        E  YAE    
Sbjct: 209 ERLVA--GSGTAIVGVDDSHSTLIADRIERAGVKVERISKRNVVS-----EGLYAEGSQI 261

Query: 305 LNFESSWGEGELHA------PLIGEFNACNLLLALATLLSLGFEKSALLATAPKLRPVLG 358
           L   +  G   L         L G  NA N   A+A  L++G  +  + A       +  
Sbjct: 262 L--RAHGGTSSLLVDLDGIQTLRGSHNAQNAAAAIAACLAVGVSEEEIRAGLKSFPGLKH 319

Query: 359 RMELFQREQKAKMVVD-YAHTPDALEKAL 386
           RM+   R      V D  A   DA   AL
Sbjct: 320 RMQPVGRRGNVTFVNDSKATNADAAAPAL 348