Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Rhodanobacter sp000427505 FW510-R12

 Score =  289 bits (739), Expect = 1e-82
 Identities = 177/434 (40%), Positives = 248/434 (57%), Gaps = 8/434 (1%)

Query: 17  LIGEDRAVSAVSTDSRAIPAEALFVALVGERFDAHDFASQAVTGGAVALLVERELDAECS 76
           L G D  V+ V+ D+R +    LFVA+ GER D HD+ ++A   GAVA LV R++D+   
Sbjct: 15  LFGSDVEVTGVAIDTRKLKPGDLFVAIRGERVDGHDYLAEAAARGAVAALVTRKVDSALP 74

Query: 77  QLVVADTKQALGQLGSWVHAQCQTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFN 136
           QL+V +T+ ALG L S V AQ     V ITGS GKTTVK +VASILS+ G+   + GNFN
Sbjct: 75  QLLVDNTELALGDLASAVRAQRNVRVVGITGSNGKTTVKTLVASILSRHGRTHVSAGNFN 134

Query: 137 NDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMD 196
           N++G+PL+LL    +  YAV E+GA   G+IAY  A+ +PD+ LV  +A AHL   GS++
Sbjct: 135 NELGLPLSLLAMPPDTGYAVFEMGAGKPGDIAYLAAIARPDIGLVTLIAPAHLARMGSIE 194

Query: 197 GVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLN 256
           GV   KG +YQ L A  +AI+N D     ++  +   + V  F   +  AD    D+   
Sbjct: 195 GVAETKGALYQSLPADGIAIINADDAFASFFAGLAGARRVLRF-GLEQPAD-VGADIVEQ 252

Query: 257 ALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKG 316
            +  + F L TP G+  V L + G+HN+ANALAA A++L +   L  I  GL  +  V G
Sbjct: 253 RVDGSRFVLSTPQGDAEVALPLPGRHNIANALAATAVALALEVPLGTIVAGLEQVPGVAG 312

Query: 317 RVDMAQLRDDITLIDDSYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDESLALHQQV 376
           R+    +    TLIDDSYNA+  +M AA++ L      RWL+LG+MAELG ++ ALH  +
Sbjct: 313 RLRRETMTGGWTLIDDSYNANPSSMAAAIDTLLLAGGERWLVLGDMAELGPDARALHAGI 372

Query: 377 GEHAAPFGFEFVLTYGK--DAKVISDLCQGHHFATHQDMMTFIEQHIEQQQGRTQVLLVK 434
           G  A   G E +   G    A V +    G HF     ++  ++  +    G T   LVK
Sbjct: 373 GVRARERGVERLFAVGPLGVATVEAFGAGGEHFEDKAALIAVLQAQL--HAGVT--CLVK 428

Query: 435 GANSAGMSKIAAAL 448
           G+ SAGM ++  AL
Sbjct: 429 GSRSAGMEQVVVAL 442