Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase from Pseudomonas simiae WCS417

 Score = 71.6 bits (174), Expect = 5e-17
 Identities = 82/309 (26%), Positives = 130/309 (42%), Gaps = 38/309 (12%)

Query: 99  QTPTVAITGSCGKTTVKEMVASILSQKGQVLYTQGNFNNDIGVPLTLLRSTTEDDYAVIE 158
           Q P VAI+GS  K+TV  +V  + +  G+ +   GN    +G P   L S   + Y V+E
Sbjct: 108 QAPIVAISGSNAKSTVTTLVGEMAAAAGKRVAVGGN----LGTPALDLLSDDVELY-VME 162

Query: 159 LGANHVGEIAYTTALVKPDVALVNNVAAAHLEGFGSMDGVKRAKGEIYQGLQAGAVAIVN 218
           L +  +     TT  +  +VA V NV+  H++ +  +     AK  I++G +     +VN
Sbjct: 163 LSSFQLE----TTHDLGAEVATVLNVSEDHMDRYSGLPAYHLAKHRIFRGAKQ---VVVN 215

Query: 219 --------LDSNGGDYWKAVLADKTVKTFSATDHNADFYPRDVRLNALGIASFTLVTPVG 270
                   L   G   W   L     K F   + N + Y             F  + PV 
Sbjct: 216 RQDALSRPLMGEGLPCWTFGLGKPDFKAFGIREENGEKYLA---------FEFQNLMPVR 266

Query: 271 EVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQGLAHLSKVKGRVDMAQLRDDITLI 330
           E    L I G HN +NALAA AL   +G     +   L     ++ R    +  D ++  
Sbjct: 267 E----LKIRGAHNQSNALAALALGHAVGLPFDAMLSALRTFGGLEHRCQWVRDLDGVSYY 322

Query: 331 DDSYNASVPAMKAAVELLGSFSAVRWLILGNMAELGDESLALHQQVGEHAAPFGFEFVLT 390
           +DS   +V A  AA+E LG+    + +++      G +   L   V EH        V+ 
Sbjct: 323 NDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGADFKDLKGPVAEHC-----RAVVL 377

Query: 391 YGKDAKVIS 399
            G+D+ +I+
Sbjct: 378 MGRDSDLIA 386