Pairwise Alignments

Query, 453 a.a., UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 1031 a.a., FIG00732904: hypothetical protein from Variovorax sp. SCN45

 Score = 89.7 bits (221), Expect = 4e-22
 Identities = 98/392 (25%), Positives = 164/392 (41%), Gaps = 26/392 (6%)

Query: 71   LDAECSQLVVADTKQALGQLGSWVHAQCQTP--TVAITGS-CGKTTVKEMVASILSQKGQ 127
            LD     L V +  Q++  LG   HA+C+       + GS  G  TV  M+A  L+  G+
Sbjct: 650  LDKRVPVLKVQNVLQSVLLLGD--HARCEFTGRVCGVLGSGAGSGTVTAMLAGALTVWGE 707

Query: 128  VLYTQGNFNNDIGVPLTLLRSTTEDDYAVIELGANHVGEIAYTTALVKPDVALVNNVAAA 187
            V   +GN +   G+   +        Y V+E+GA+H+   A    LV+P + +V  ++AA
Sbjct: 708  VAQPEGNISLPSGIAWNMTCMPRHAAYWVMEMGASHMPASA---QLVRPSLVVVTGLSAA 764

Query: 188  HLEGFGSMDGVKRAKGEIYQGLQAGAVAIVNLDSNGGDYWKAVLADKTVKTFSATDHNAD 247
              +  G  +   R    I+Q +  G   ++N D      +      + ++  +  +H   
Sbjct: 765  SQKHRGPSEAAARLDSRIFQSMSPGDSVVLNRDMPEFATFAEAAMTQQLQIVTYGEHK-- 822

Query: 248  FYPRDVRLNALGIASFTLVTPVGEVGVELGIMGQHNVANALAAAALSLEMGASLAEIGQG 307
                DVRL A        +       + L   G+H  A+A+AA A    +   LA   + 
Sbjct: 823  --DADVRLLAFDHGEVQALVAGEPFQLRLNAPGRHMGASAIAALAALQALRLPLAAAVEP 880

Query: 308  LAHLSKVKGRVDMAQLR---DDITLIDDSYNASVPAMKAAVELLGSF---SAVRWLILGN 361
             AH     GR  +  +        LID++Y+A+  +M+AA+E+L       A R  ILG+
Sbjct: 881  FAHFEPPGGRGALHTIHIGGGSFKLIDETYDANPSSMRAALEMLSQAPCEPARRVAILGD 940

Query: 362  MAELGDESLALHQQVGEHAAPFGFEFVLTYGKDAKV----ISDLCQGHHFATHQDMMTFI 417
            M ELG  +   H  +         + VL  G   +     I    + H F    D+ T +
Sbjct: 941  MQELGPAAQRHHLDLEAELLASQPDRVLLCGPLMRALHTRIRTKVRSHWFVDVSDLSTAL 1000

Query: 418  EQHIEQQQGRTQVLLVKGANSAGMSKIAAALK 449
               ++        +L K +   G+S++A  LK
Sbjct: 1001 GGLLQPGDW----VLAKSSAGIGLSRLARVLK 1028